DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment croc and foxl1

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_012817795.1 Gene:foxl1 / 100038263 XenbaseID:XB-GENE-5880620 Length:406 Species:Xenopus tropicalis


Alignment Length:415 Identity:126/415 - (30%)
Similarity:174/415 - (41%) Gaps:122/415 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD 134
            ||||||||||||||:::.|.:||||||||:||:|||:|.|||||||||||||||||:||:||.|:
 Frog    51 KPPYSYIALIAMAIKDSPDHRVTLNGIYQFIMDRFPFYHDNKQGWQNSIRHNLSLNDCFIKVPRE 115

  Fly   135 DKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLKLMT 199
            ..:|||||||||||...:||:||:|.||:|                            ||..::.
 Frog   116 KGRPGKGSYWTLDPKCLDMFENGNFRRRKR----------------------------KPKPILC 152

  Fly   200 NGILEAKHMAAHAAHFKKEPLMDLGCL---------SGKEVSHAAML-----NSCH-DSLAQMNH 249
            .   |.|...|.||.::   |.|..|.         :|:..|..|.|     ::|. ||..:|: 
 Frog   153 Q---EGKRHKAEAAEYR---LADAACKGTTCKVAGNTGQNGSQDAPLGRKPTSACEKDSAGEMS- 210

  Fly   250 LAGGGVEHPGFTVDSLMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHV 314
                ..|..|.:.|.:.....|..|        |::..:....:.:|...:.:....:.|:    
 Frog   211 ----SSEDEGGSGDYIKTSPAPECH--------NQERTSGTYWNSLHPSFYVSVPLLSDQV---- 259

  Fly   315 AHVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGGWYTPETPPSEPVPHNGQQGTPTHPGHNNN 379
                 .|:...:|:.....|:.......                      .|..|.|: ||.||.
 Frog   260 -----TLSSKREGSQAHEQGNRLLACGA----------------------QGHLGAPS-PGSNNE 296

  Fly   380 NSSSVLNHNGVGNGGGGGGGGGGGSSSVLTSSPTSALGFR-DMIFEQNQSCQLDTGSPTGSLQSA 443
            .:                |............|..||..|. |.|..::.....:.|:|       
 Frog   297 KA----------------GATDANCKEAEQLSQKSARSFSIDSILSRSDQSAPECGAP------- 338

  Fly   444 SPPASASV----AAASAAAAAAVIS 464
            :|||.:.|    .|||....|||.|
 Frog   339 APPAVSKVPEDNVAASYRCHAAVPS 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 66/88 (75%)
foxl1XP_012817795.1 FH_FOXL1 49..146 CDD:410801 70/122 (57%)

Return to query results.
Submit another query.