DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxl2l

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001122282.1 Gene:foxl2l / 100004081 ZFINID:ZDB-GENE-081022-71 Length:260 Species:Danio rerio


Alignment Length:309 Identity:98/309 - (31%)
Similarity:135/309 - (43%) Gaps:80/309 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 GAPHQNKEIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSL 124
            |.|.......||||||:|||||||:.:.|||:|||.||.||:.:||||..||:||||||||||||
Zfish    25 GCPGAAPAPEKPPYSYVALIAMAIRESEDKKLTLNDIYSYIISKFPYYEKNKKGWQNSIRHNLSL 89

  Fly   125 NECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKL 189
            ||||||:.|:.....||::|||||...:||:.|::.||||              :||        
Zfish    90 NECFVKIPRESGGERKGNFWTLDPAFNDMFEKGNYRRRRR--------------VKR-------- 132

  Fly   190 AEMKPLKLMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVS--HAA--MLNSCHDSLAQMNHL 250
             ..:|..|.:.......:.......:.:.|.:..|..|....|  |.:  ||.:...  ...|..
Zfish   133 -PYRPAALPSGYNFADPYCLQQEPVYWQSPFVSSGSWSHHSGSPTHISSYMLGNARP--LSPNDF 194

  Fly   251 AGGGVEHPGFTVDSLMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHVA 315
            |...|        |..:.::|..|.|..|||.:.:.|..::.                       
Zfish   195 ANSPV--------SYYHGHHPHFHPSYRPYHRHPNALVPLSG----------------------- 228

  Fly   316 HVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGGWYTPETPPSEPVPH 364
             :..|::|||            ::|||..       |.|:....|.|.|
Zfish   229 -MTPPVSPGG------------SSISTCS-------YAPQNSHPELVHH 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 58/89 (65%)
foxl2lNP_001122282.1 FH_FOXL2 35..123 CDD:410802 57/87 (66%)

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