DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxf2b

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_003200754.1 Gene:foxf2b / 100002904 ZFINID:ZDB-GENE-041001-130 Length:429 Species:Danio rerio


Alignment Length:525 Identity:133/525 - (25%)
Similarity:186/525 - (35%) Gaps:197/525 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FSDQNSF----TRHYAQTAAGYGSASAVAAASSASAAAAAHYA-------YDQYSRYPYSASA-Y 57
            ||..|..    |.....|.:.:|...:.....::.|..|.|..       .:::|....|... .
Zfish    40 FSSDNGLFSYVTAGPMTTESSHGPLGSTPPTRTSPATTALHPGLMNSTGNLEEHSAVSKSKKTNS 104

  Fly    58 GLGAPHQNKEIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNL 122
            ||..|.      ||||||||||.||||:|..|::||:.|||::..|||::|.:.|||:||:||||
Zfish   105 GLRRPE------KPPYSYIALIVMAIQSAPTKRLTLSEIYQFLQTRFPFFRGSYQGWKNSVRHNL 163

  Fly   123 SLNECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNE 187
            ||||||:|:.:...:||||.|||:||.|..||:.|||.||.|.|::                   
Zfish   164 SLNECFIKLPKGLGRPGKGHYWTIDPTSEFMFEEGSFRRRPRGFRR------------------- 209

  Fly   188 KLAEMKPLKLMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAG 252
            |...|||:..|.||                   :..|         :|:|....|..:....|| 
Zfish   210 KCQAMKPMYRMMNG-------------------LGFG---------SAILPQSFDYQSPTGALA- 245

  Fly   253 GGVEHPGFTVDSLMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHHAQQ-------- 309
                                .|.|.|...|:.....:::|.  ||.|.:.::.|...        
Zfish   246 --------------------CHSSGYNLDLSGSGYESISSG--HHGHMSPSSRHGYMSSCPMPGN 288

  Fly   310 ----LQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGGWYTPE----TPPSEPV-PHN 365
                ::.:.:.|     |......|...||||.:.||....:....|..:    |..|:|. .|.
Zfish   289 GDYAVESNTSPV-----PSSPAVAGALEGHSPYSESTALWASSNSSYLKQANTITSNSQPTGQHP 348

  Fly   366 G------QQG------------------TPTHPGHNNNNSSSVLNHNGVGNGGGGGGGGGGGSSS 406
            |      :||                  .|||..........:||.||:                
Zfish   349 GIFTYSLEQGYIQQSARDNADMSVGLSRYPTHSSPVGERKDFMLNFNGI---------------- 397

  Fly   407 VLTSSPTSALGFRDMIFEQNQSCQLDTGSPTGSLQSASPPASASVAAASAAAAAAVISSHHHHHH 471
              ||...||.|:                                             ..||||||
Zfish   398 --TSFHPSAGGY---------------------------------------------YHHHHHHH 415

  Fly   472 HHAAL 476
            ||.::
Zfish   416 HHQSM 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 54/89 (61%)
foxf2bXP_003200754.1 FH_FOXF1 112..210 CDD:410823 59/116 (51%)

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