DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx6 and TLG1

DIOPT Version :9

Sequence 1:NP_995816.1 Gene:Syx6 / 40373 FlyBaseID:FBgn0037084 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_010756.3 Gene:TLG1 / 852079 SGDID:S000002876 Length:224 Species:Saccharomyces cerevisiae


Alignment Length:318 Identity:66/318 - (20%)
Similarity:117/318 - (36%) Gaps:108/318 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PNSEVFK----ALNKTRGLYLRWRELGENGGTEAEWTTTELRNSLRSIEWDLEDLEDTISIVEKN 86
            |..:|.|    .||:......|....|::...|      |:::.|:.:|..:.||:.:|.:::::
Yeast     7 PFQQVVKDTKEQLNRINNYITRHNTAGDDDQEE------EIQDILKDVEETIVDLDRSIIVMKRD 65

  Fly    87 PSKFRIDNRELSSRRHFIDNTRDEVKQMKDKMSLNRSRDRDITAHQPLLDNDRHSPNHNHSIAIP 151
                  :|.::|.|...:.|    :||..|.:.|.  .||.|              ..:....||
Yeast    66 ------ENEDVSGREAQVKN----IKQQLDALKLR--FDRRI--------------QESTQTTIP 104

  Fly   152 NSNSNSNEYHQHPHNDRTYLVECPNGNSLINSGSQVANTIAGTMSAAAAAASRHSGTKYSKLENA 216
            ...:                ||    ||.:|:                           |..|| 
Yeast   105 LEET----------------VE----NSTLNT---------------------------SMAEN- 121

  Fly   217 LDSPSHYGQTHHGGMDSPSHRYVGETVSIQQRMIQGQDEQLDMISDSIGTLKTVSRQIGVELDEQ 281
                      :.|||.:|          .|::|::.||..||.|..::..|...::.:|.||:.|
Yeast   122 ----------NDGGMSNP----------FQEQMLREQDVHLDGIHKTMQNLHIQAQTMGDELENQ 166

  Fly   282 AVMLDDFGNEFDTTESKLDTTMKKVAKVLHMNNDKRQWAAILILSGLLLFVIILFIIL 339
            ..:||:.....|...:||....:::..|...|.:|.....|    |||:.|:|:.::|
Yeast   167 GQLLDNMDEGMDGVVNKLARGRRQLEWVYEKNKEKYDDCCI----GLLIVVLIVLLVL 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx6NP_995816.1 Syntaxin-6_N 29..115 CDD:286286 19/89 (21%)
SNARE_Syntaxin6 250..315 CDD:277204 17/64 (27%)
TLG1NP_010756.3 SNARE_NTD_Tlg1p-like 6..92 CDD:410570 22/102 (22%)
SNARE_Syntaxin6 135..200 CDD:277204 17/64 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3202
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53942
OrthoFinder 1 1.000 - - FOG0003084
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101619
Panther 1 1.100 - - LDO PTHR19957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1528
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.850

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