DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx6 and stx6

DIOPT Version :9

Sequence 1:NP_995816.1 Gene:Syx6 / 40373 FlyBaseID:FBgn0037084 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001017879.1 Gene:stx6 / 550577 ZFINID:ZDB-GENE-030131-858 Length:256 Species:Danio rerio


Alignment Length:322 Identity:129/322 - (40%)
Similarity:177/322 - (54%) Gaps:77/322 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PF--PNSEVFKALNKTRGLYLRWRELGENGG----TEAEWTTTELRNSLRSIEWDLEDLEDTISI 82
            ||  ...||.||:|..:||:.||.||.::.|    .|.:|||.||||||||||||||||::||||
Zfish     6 PFFVVKGEVQKAVNTAQGLHQRWIELLQDAGGASKEEVDWTTNELRNSLRSIEWDLEDLDETISI 70

  Fly    83 VEKNPSKFRIDNRELSSRRHFIDNTRDEVKQMKDKMSLNRSRDRDITAHQPLLDNDRHSPNHNHS 147
            ||.||.||.:|..||:.|:.||.:||..|::|||.|:                     ||   .:
Zfish    71 VEANPKKFNLDAMELAKRKAFITSTRQTVREMKDHMT---------------------SP---MA 111

  Fly   148 IAIPNSNSNSNEYHQHPHNDRTYLVECPNGNSLINSGSQVANTIAGTMSAAAAAASRHSGTKYSK 212
            |.:|                     |..|..:|:..|            .:.....:.||.||::
Zfish   112 ITVP---------------------EKKNRQTLMGEG------------GSRGPIWQPSGEKYTR 143

  Fly   213 LENALDSPSHYGQTHHGGMDSPSHRYVGETVSIQQRMIQGQDEQLDMISDSIGTLKTVSRQIGVE 277
            |:|.|              .:.:.:::.|..:.||.:.:.|||.|:::|.:||.||.:|::||.|
Zfish   144 LDNEL--------------QTANSQFIEEQQTQQQLIAEKQDEHLELVSGTIGVLKNMSQRIGQE 194

  Fly   278 LDEQAVMLDDFGNEFDTTESKLDTTMKKVAKVLHMNNDKRQWAAILILSGLLLFVIILFIIL 339
            |||||||||||.:|.|:|:|:||..|||:|||.||.:|||||.||.:|..:|..||:|||||
Zfish   195 LDEQAVMLDDFSHEMDSTQSRLDNVMKKLAKVSHMTSDKRQWCAIGVLLAILFVVILLFIIL 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx6NP_995816.1 Syntaxin-6_N 29..115 CDD:286286 51/89 (57%)
SNARE_Syntaxin6 250..315 CDD:277204 38/64 (59%)
stx6NP_001017879.1 Syntaxin-6_N 13..103 CDD:286286 51/89 (57%)
SNARE_Syntaxin6 168..232 CDD:277204 38/63 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589424
Domainoid 1 1.000 101 1.000 Domainoid score I6893
eggNOG 1 0.900 - - E1_KOG3202
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H115622
Inparanoid 1 1.050 204 1.000 Inparanoid score I3707
OMA 1 1.010 - - QHG53942
OrthoDB 1 1.010 - - D1563292at2759
OrthoFinder 1 1.000 - - FOG0003084
OrthoInspector 1 1.000 - - otm25128
orthoMCL 1 0.900 - - OOG6_101619
Panther 1 1.100 - - O PTHR19957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1528
SonicParanoid 1 1.000 - - X3993
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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