DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx6 and stx6

DIOPT Version :10

Sequence 1:NP_995816.1 Gene:Syx6 / 40373 FlyBaseID:FBgn0037084 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001017879.1 Gene:stx6 / 550577 ZFINID:ZDB-GENE-030131-858 Length:256 Species:Danio rerio


Alignment Length:322 Identity:129/322 - (40%)
Similarity:177/322 - (54%) Gaps:77/322 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PF--PNSEVFKALNKTRGLYLRWRELGENGG----TEAEWTTTELRNSLRSIEWDLEDLEDTISI 82
            ||  ...||.||:|..:||:.||.||.::.|    .|.:|||.||||||||||||||||::||||
Zfish     6 PFFVVKGEVQKAVNTAQGLHQRWIELLQDAGGASKEEVDWTTNELRNSLRSIEWDLEDLDETISI 70

  Fly    83 VEKNPSKFRIDNRELSSRRHFIDNTRDEVKQMKDKMSLNRSRDRDITAHQPLLDNDRHSPNHNHS 147
            ||.||.||.:|..||:.|:.||.:||..|::|||.|:                     ||   .:
Zfish    71 VEANPKKFNLDAMELAKRKAFITSTRQTVREMKDHMT---------------------SP---MA 111

  Fly   148 IAIPNSNSNSNEYHQHPHNDRTYLVECPNGNSLINSGSQVANTIAGTMSAAAAAASRHSGTKYSK 212
            |.:|                     |..|..:|:..|            .:.....:.||.||::
Zfish   112 ITVP---------------------EKKNRQTLMGEG------------GSRGPIWQPSGEKYTR 143

  Fly   213 LENALDSPSHYGQTHHGGMDSPSHRYVGETVSIQQRMIQGQDEQLDMISDSIGTLKTVSRQIGVE 277
            |:|.|              .:.:.:::.|..:.||.:.:.|||.|:::|.:||.||.:|::||.|
Zfish   144 LDNEL--------------QTANSQFIEEQQTQQQLIAEKQDEHLELVSGTIGVLKNMSQRIGQE 194

  Fly   278 LDEQAVMLDDFGNEFDTTESKLDTTMKKVAKVLHMNNDKRQWAAILILSGLLLFVIILFIIL 339
            |||||||||||.:|.|:|:|:||..|||:|||.||.:|||||.||.:|..:|..||:|||||
Zfish   195 LDEQAVMLDDFSHEMDSTQSRLDNVMKKLAKVSHMTSDKRQWCAIGVLLAILFVVILLFIIL 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx6NP_995816.1 SNARE_NTD_STX6_STX10 24..119 CDD:410569 56/100 (56%)
SNARE_Syntaxin6 250..315 CDD:277204 38/64 (59%)
stx6NP_001017879.1 SNARE_NTD_STX6 5..107 CDD:410573 56/100 (56%)
SNARE_Syntaxin6 168..232 CDD:277204 38/63 (60%)

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