DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx6 and tlg1

DIOPT Version :9

Sequence 1:NP_995816.1 Gene:Syx6 / 40373 FlyBaseID:FBgn0037084 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_595989.1 Gene:tlg1 / 2540973 PomBaseID:SPBC36B7.07 Length:225 Species:Schizosaccharomyces pombe


Alignment Length:318 Identity:71/318 - (22%)
Similarity:118/318 - (37%) Gaps:98/318 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PF--PNSEVFKALNKTRGLYLRWRELGENGGTEAEWTTTELRNSLRSIEWDLEDLEDTISIVEKN 86
            ||  ..::....:.:.|.||..:. ...|.|..:  ..|||..::..:...|:||:..:.|..||
pombe     4 PFYEVKADASNQMEQVRKLYNSFM-AARNSGVLS--PNTELTYAIDELSETLKDLKAAVEIAMKN 65

  Fly    87 PSKFRIDNRELSSRRHFIDNTRDEVKQMKDKMSLNRSRDRDITAHQPLLDNDRHSPNHNHSIAIP 151
            ...|.:|..||.|||.|:.....|:..::.||.                             |.|
pombe    66 SEHFGLDEEELKSRRRFVSELDIELNNIQLKMG-----------------------------AAP 101

  Fly   152 NSNSNSNEYHQHPHNDRTYLVECPNGNSLINSGSQVANTIAGTMSAAAAAASRHSGTKYSKLENA 216
            ::          |.:...|.|:  ||.|            ||                       
pombe   102 ST----------PVSTEPYTVD--NGAS------------AG----------------------- 119

  Fly   217 LDSPSHYGQTHHGGMDSPSHRYVGETVSIQQRMIQGQDEQLDMISDSIGTLKTVSRQIGVELDEQ 281
            |....|          :.:.:|       |:::.|.||..||.:.|:||.::..:..:|.||.:|
pombe   120 LSEEDH----------AVNRQY-------QEQLYQQQDVMLDGVYDTIGNIRGQAALMGEELGQQ 167

  Fly   282 AVMLDDFGNEFDTTESKLDTTMKKVAKVLHMNNDKRQWAAILILSGLLLFVIILFIIL 339
            |.:||...|..:||.|||...||::......:.|.:....|.:|..:|:.:::|.|:|
pombe   168 ADLLDTLDNSIETTNSKLRRGMKRLKDFTIASADSKSGCCITVLIIILIALLVLVIVL 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx6NP_995816.1 Syntaxin-6_N 29..115 CDD:286286 23/85 (27%)
SNARE_Syntaxin6 250..315 CDD:277204 23/64 (36%)
tlg1NP_595989.1 Syntaxin-6_N 11..94 CDD:286286 23/85 (27%)
SNARE_Syntaxin6 140..201 CDD:277204 21/60 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3202
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H115622
Inparanoid 1 1.050 98 1.000 Inparanoid score I1679
OMA 1 1.010 - - QHG53942
OrthoFinder 1 1.000 - - FOG0003084
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101619
Panther 1 1.100 - - LDO PTHR19957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1528
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.860

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