DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syx6 and LOC1276910

DIOPT Version :10

Sequence 1:NP_995816.1 Gene:Syx6 / 40373 FlyBaseID:FBgn0037084 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_316317.4 Gene:LOC1276910 / 1276910 VectorBaseID:AGAMI1_008058 Length:342 Species:Anopheles gambiae


Alignment Length:346 Identity:215/346 - (62%)
Similarity:257/346 - (74%) Gaps:37/346 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PF--PNSEVFKALNKTRGLYLRWRELGE--NGGT--EAEWTTTELRNSLRSIEWDLEDLEDTISI 82
            ||  ...|||||||||||||:|||||.:  :||:  ||:||||||:|||||||||||||||||||
Mosquito     4 PFFVVKDEVFKALNKTRGLYIRWRELNDAHSGGSTAEADWTTTELKNSLRSIEWDLEDLEDTISI 68

  Fly    83 VEKNPSKFRIDNRELSSRRHFIDNTRDEVKQMKDKMSLNRSRDRDITAHQPLLDNDRHSPN---- 143
            ||||||||:||||||||||:|||.||||||.|||:||::|:||:||||.||||||...||.    
Mosquito    69 VEKNPSKFKIDNRELSSRRYFIDATRDEVKSMKDRMSISRNRDQDITARQPLLDNVESSPQQLQS 133

  Fly   144 ----HNHSI-------AIPNSNSNSNEYHQHPHNDRTYLVECPNGNSLINSGSQVAN-TIAGT-- 194
                :|:||       |:.|.|:.:.....|..:..|.       |..:|:.|||.| .:|.|  
Mosquito   134 KNYINNNSIISNGGGVAVLNGNNGTAGGGLHSSSSSTL-------NCNLNNNSQVNNLNLAETGK 191

  Fly   195 ---MSAAAAAASRHSGTKYSKLENAL-DSPSHYGQTHHGG--MDSPSHRYVGETVSIQQRMIQGQ 253
               .||.||.||||||.|||||||.| ||||||..:..||  :||.|.|:|.:|::.|.|::.||
Mosquito   192 HLISSAGAAMASRHSGAKYSKLENNLDDSPSHYVPSASGGAVLDSNSSRFVEDTLATQHRILVGQ 256

  Fly   254 DEQLDMISDSIGTLKTVSRQIGVELDEQAVMLDDFGNEFDTTESKLDTTMKKVAKVLHMNNDKRQ 318
            |||||:||||||||||||||||:||||||||||:||||.:.|:||||.|||||||||||:||:||
Mosquito   257 DEQLDIISDSIGTLKTVSRQIGIELDEQAVMLDEFGNELEQTDSKLDATMKKVAKVLHMSNDRRQ 321

  Fly   319 WAAILILSGLLLFVIILFIIL 339
            |.||::||..|:.|||::|||
Mosquito   322 WTAIVVLSIALVVVIIIYIIL 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx6NP_995816.1 SNARE_NTD_STX6_STX10 24..119 CDD:410569 79/100 (79%)
SNARE_Syntaxin6 250..315 CDD:277204 53/64 (83%)
LOC1276910XP_316317.4 SNARE_NTD_STX6_STX10 3..105 CDD:410569 79/100 (79%)
SNARE_Syntaxin6 256..318 CDD:277204 52/61 (85%)

Return to query results.
Submit another query.