DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx6 and STX6

DIOPT Version :10

Sequence 1:NP_995816.1 Gene:Syx6 / 40373 FlyBaseID:FBgn0037084 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_005810.1 Gene:STX6 / 10228 HGNCID:11441 Length:255 Species:Homo sapiens


Alignment Length:323 Identity:131/323 - (40%)
Similarity:179/323 - (55%) Gaps:80/323 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PF--PNSEVFKALNKTRGLYLRWRELGENGGT----EAEWTTTELRNSLRSIEWDLEDLEDTISI 82
            ||  ...||.||:|..:||:.||.||.::..|    |.:|||.||||:|||||||||||::||||
Human     6 PFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDLEDLDETISI 70

  Fly    83 VEKNPSKFRIDNRELSSRRHFIDNTRDEVKQMKDKMSLNRSRDRDITAHQPLLDNDRHSPNHNHS 147
            ||.||.||.:|..|||.|:.||.:||..|:.|||:||.:     .:.|                 
Human    71 VEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTS-----SVQA----------------- 113

  Fly   148 IAIPNSNSNSNEYHQHPHNDRTYLVECPNGNSLI-NSGSQVANTIAGTMSAAAAAASRHSGTKYS 211
                                   |.|..|..:|: :||||  |...||..            ||.
Human   114 -----------------------LAERKNRQALLGDSGSQ--NWSTGTTD------------KYG 141

  Fly   212 KLENALDSPSHYGQTHHGGMDSPSHRYVGETVSIQQRMIQGQDEQLDMISDSIGTLKTVSRQIGV 276
            :|:..|...:             || ::.|..:.||.:::.|||||:::|.|||.||.:|::||.
Human   142 RLDRELQRAN-------------SH-FIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGG 192

  Fly   277 ELDEQAVMLDDFGNEFDTTESKLDTTMKKVAKVLHMNNDKRQWAAILILSGLLLFVIILFIIL 339
            ||:||||||:||.:|.::|:|:||..|||:|||.||.:|:|||.||.||..:||.|:|||::|
Human   193 ELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAILFAVLLVVLILFLVL 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx6NP_995816.1 SNARE_NTD_STX6_STX10 24..119 CDD:410569 56/100 (56%)
SNARE_Syntaxin6 250..315 CDD:277204 37/64 (58%)
STX6NP_005810.1 Required for interaction with VPS51. /evidence=ECO:0000250|UniProtKB:Q63635 2..168 79/234 (34%)
SNARE_NTD_STX6 5..107 CDD:410573 56/100 (56%)
SNARE_Syntaxin6 166..231 CDD:277204 37/64 (58%)

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