DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx6 and stx10

DIOPT Version :9

Sequence 1:NP_995816.1 Gene:Syx6 / 40373 FlyBaseID:FBgn0037084 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001313376.1 Gene:stx10 / 100151249 ZFINID:ZDB-GENE-041111-53 Length:247 Species:Danio rerio


Alignment Length:322 Identity:114/322 - (35%)
Similarity:161/322 - (50%) Gaps:86/322 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PF--PNSEVFKALNKTRGLYLRWRELGEN----GGTEAEWTTTELRNSLRSIEWDLEDLEDTISI 82
            ||  ...||.|||:|.:|||.||.||.:.    ...|.:|:|.||||.||:|:||||||.:||||
Zfish     6 PFFVVKGEVQKALSKAQGLYERWEELLQEETPVSRDELDWSTNELRNCLRAIDWDLEDLHETISI 70

  Fly    83 VEKNPSKFRIDNRELSSRRHFIDNTRDEVKQMKDKMSLNRSRDRDITAHQPLLDNDRHSPNHNHS 147
            ||.||.|||:...||..||.|::.||..|:.||:::|                     ||:    
Zfish    71 VEANPGKFRLGEHELQERRDFVERTRKSVQLMKEQLS---------------------SPS---- 110

  Fly   148 IAIPNSNSNSNEYHQHPHNDRTYLVECPNGNSLINSGSQVANTIAGTMSAAAAAASRHSGTKYSK 212
             |:..:                   |..|..:|:                .|.|..|::|.    
Zfish   111 -AVAQA-------------------EKKNKQALL----------------GATAKDRYAGL---- 135

  Fly   213 LENALDSPSHYGQTHHGGMDSPSHRYVGETVSIQQRMIQGQDEQLDMISDSIGTLKTVSRQIGVE 277
                        :.|   :.|.:.||:.|....||.::|.|||.|::::.||..||.:|.:||.|
Zfish   136 ------------EPH---LVSANSRYIQEQQEQQQLIMQDQDEHLELVTGSIRVLKDMSSRIGDE 185

  Fly   278 LDEQAVMLDDFGNEFDTTESKLDTTMKKVAKVLHMNNDKRQWAAILILSGLLLFVIILFIIL 339
            ||||||||.:|..|.|.|.|::|:.:||:.||.||.:.:|||.||.:|..:|:.|:|||..:
Zfish   186 LDEQAVMLGEFNEEMDQTGSRMDSVLKKMEKVSHMTSSRRQWCAIGVLVIILIVVLILFFAI 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx6NP_995816.1 Syntaxin-6_N 29..115 CDD:286286 48/89 (54%)
SNARE_Syntaxin6 250..315 CDD:277204 33/64 (52%)
stx10NP_001313376.1 Syntaxin-6_N 13..103 CDD:312631 48/89 (54%)
SNARE_Syntaxin6 158..222 CDD:277204 33/63 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589422
Domainoid 1 1.000 101 1.000 Domainoid score I6893
eggNOG 1 0.900 - - E1_KOG3202
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 204 1.000 Inparanoid score I3707
OMA 1 1.010 - - QHG53942
OrthoDB 1 1.010 - - D1563292at2759
OrthoFinder 1 1.000 - - FOG0003084
OrthoInspector 1 1.000 - - otm25128
orthoMCL 1 0.900 - - OOG6_101619
Panther 1 1.100 - - LDO PTHR19957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1528
SonicParanoid 1 1.000 - - X3993
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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