DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alp1 and Akp3

DIOPT Version :9

Sequence 1:NP_001262159.1 Gene:Alp1 / 40372 FlyBaseID:FBgn0283479 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_073171.2 Gene:Akp3 / 64621 RGDID:621650 Length:558 Species:Rattus norvegicus


Alignment Length:500 Identity:213/500 - (42%)
Similarity:281/500 - (56%) Gaps:34/500 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 ELKSKEFWFHDAQRTLYNKLSTPPNQYRAKNVIFFLGDGMSVPTVTAGRIFDGQLRGVVGERNRL 100
            |.::..||...|...|.......|.|..|||:|.||||||.||||||.||..|||.|.:|....|
  Rat    24 EEENPAFWNQKAADALNVAKKLQPIQTSAKNLIIFLGDGMGVPTVTATRILKGQLEGNLGPETPL 88

  Fly   101 EFEKFNYVGLSKTYCVNKQVADSACTASAYLSGIKANYLTIGVTADVELNDCRGSRLPQNRLSSI 165
            ..:.|.|:.|||||.|::||.|||.||:|||.|:|.||.||||:|....:.|..:.  .|.:.|:
  Rat    89 AMDHFPYMALSKTYSVDRQVPDSASTATAYLCGVKTNYKTIGVSAAARFDQCNTTF--GNEVLSV 151

  Fly   166 AAWALKGSKSAGLVTTTRVTHASPAGVYAHTSNRDFESDYDVTKLGQNPGNCPDIAQQLIDGDVG 230
            ...|.|..||.|:||||||.||||||.|.||.||::..|.|:.......| |.|||.||:.   .
  Rat   152 MYRAKKAGKSVGVVTTTRVQHASPAGTYVHTVNRNWYGDADMPASALQEG-CKDIATQLVS---N 212

  Fly   231 KRLRVVMGGGTIKFL-------PNTTNDVFGNKGQRLDNRNLIEEWQQTKPGNARVVFSRTDLLN 288
            ..:.|::|||. |::       |...||| ...|.|||.:||::||.....| ::.|::|.:|:.
  Rat   213 MDINVILGGGR-KYMFPAGTPDPEYPNDV-NETGTRLDGKNLVQEWLSKHQG-SQYVWNRQELIQ 274

  Fly   289 NDAQ-NTDFLLGLFNASHLAYHMD-DSIDTPTLPEMTAAAINVLSRDPNGYFLFVEGGRIDHAHH 351
            .... :..:|:|||......:.:. |.:..|:|.:||.||::||||:|.|::|||||||||..||
  Rat   275 KSLDPSVTYLMGLFEPVDTKFEIQRDPLMDPSLKDMTEAALHVLSRNPKGFYLFVEGGRIDRGHH 339

  Fly   352 ETKAKKALDETVQFSDAVRKARQLTNPWDTLIVVSADHGHTVTISGYPDVNNSIVGLNSELSNVD 416
            ...|..||.|.|.|..|:.:|.|||:..|||.:|:|||.|..:..||.....||.|| :.|:.:|
  Rat   340 LGTAYLALTEAVMFDSAIERASQLTSEQDTLTIVTADHSHVFSFGGYTLRGTSIFGL-APLNALD 403

  Fly   417 QLPYTSISYANGPAYERFYKSTDGVVERVDLRNLDFSKPDAIYPHGVPMTEETHGGGDVAVYAHV 481
            ..|||||.|.|||.|.       |..||.::.:.:...|.......||:..|||||.|||::|  
  Rat   404 GKPYTSILYGNGPGYV-------GTGERPNVTDAESHDPSYQQQAAVPVKSETHGGEDVAIFA-- 459

  Fly   482 VEYLLQGPWSHLFTGVYEQSTLPHLMGFASCLGPGITYCDLQPKA 526
                 :||.:||..||.||:.:.|:|.||.||.| .|.|.|.|.|
  Rat   460 -----RGPQAHLLHGVQEQNYIAHVMAFAGCLEP-YTDCGLAPPA 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp1NP_001262159.1 alkPPc 65..514 CDD:214515 198/457 (43%)
Akp3NP_073171.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351425
Domainoid 1 1.000 373 1.000 Domainoid score I856
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48882
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - mtm8918
orthoMCL 1 0.900 - - OOG6_100381
Panther 1 1.100 - - O PTHR11596
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X159
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.860

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