DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alp1 and Alp13

DIOPT Version :10

Sequence 1:NP_001262159.1 Gene:Alp1 / 40372 FlyBaseID:FBgn0283479 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_649978.2 Gene:Alp13 / 41236 FlyBaseID:FBgn0037786 Length:479 Species:Drosophila melanogaster


Alignment Length:437 Identity:112/437 - (25%)
Similarity:174/437 - (39%) Gaps:99/437 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SKEFWFHDAQRTLYNKLSTPPNQYRAKNVIFFLGDGMS--------VPTVTAGRIFDGQLRGVVG 95
            |::.|:......| |:...|.:....|||..|:..|:.        .||..|.|          |
  Fly    67 SQKIWYDKGIDEL-NEALRPQDLTYPKNVRIFVIQGIDGRDWAAFRFPTSDASR----------G 120

  Fly    96 ERNRLEFEKFNYVGLSKTYCVNKQVADSACTASAYLSGIKANYLTIGVTADV---ELNDC-RGSR 156
            ..|.: :::|.::...|..|..:.....|..:.|         |.:|:..|.   ...|| |...
  Fly   121 NTNFI-WDRFPHLARLKNSCSQQFPCQVASVSRA---------LWLGIPLDKVPDNQQDCGRLFN 175

  Fly   157 LPQNRLSSIAAWALKGSKSAGLVTTTRVTHASPAGVYAHTSNRDFESDYDVTKLGQNPGNCPDIA 221
            ..|..:|.:....|.|.:: |.|||.|:|  .|.|.....:|.:||.| :...|......|.|||
  Fly   176 ATQGPISILRQAQLAGLRT-GFVTTQRIT--GPTGAALGNANGNFECD-ESMPLNSIKSGCQDIA 236

  Fly   222 QQLIDGDVGKRLRVVMGGG---TIKFLPNTTND-VFGNKGQRLDNRNLIEEWQQTKPGNA---RV 279
            ||||..:.||.|.|::|||   ....:|||..| |.....:..|.|||:::|:..|...:   |:
  Fly   237 QQLISDETGKFLNVLIGGGRQMLSSLVPNTKYDPVDEMLCESNDGRNLLKDWRNQKLKESKINRI 301

  Fly   280 VFS----RTDLLNNDAQNTDFLLGLFNASHLAYHMDDSIDTPTLPEMTAAAINVLSRDPNGYFLF 340
            :|.    |.:|.:.::.:.|:|:|:.....|:    .:...|:|..|...::|||::...||.|.
  Fly   302 IFDLIQRRDELESLNSSSFDYLMGVMANGDLS----GNSKAPSLKLMVDKSLNVLTKYKQGYLLI 362

  Fly   341 VEGGRIDHAHHETKAKKALDETVQF-SDAVRKARQLTNPWDTLIVVSADHG-------------- 390
            ||                     || ...:.|..||....|||:.:..|..              
  Fly   363 VE---------------------QFIPSGIDKREQLQLLNDTLVNLHKDQDTLTLVLMTNAIYPK 406

  Fly   391 -------HTVTISGYPDVNNSIVGLNSEL-SNVDQLPYTSISYANGP 429
                   .|.|||..|::.|.   ..||: ..:.|:|..|:.:|.||
  Fly   407 PSLDVSEETETISLLPEIFNE---AESEIQKRLHQMPSESLLFAQGP 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp1NP_001262159.1 alkPPc 65..514 CDD:214515 107/411 (26%)
Alp13NP_649978.2 ALP_like 127..472 CDD:474031 96/365 (26%)

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