DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alp1 and phu

DIOPT Version :10

Sequence 1:NP_001262159.1 Gene:Alp1 / 40372 FlyBaseID:FBgn0283479 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_649897.4 Gene:phu / 41135 FlyBaseID:FBgn0043791 Length:546 Species:Drosophila melanogaster


Alignment Length:484 Identity:244/484 - (50%)
Similarity:319/484 - (65%) Gaps:19/484 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SELKSKEFWFHDAQRTLYNKLSTP--PNQYRAKNVIFFLGDGMSVPTVTAGRIFDGQLRGVVGER 97
            ||.:..|:|...|.:||..:|.:.  .|...|:||:.|:|||||:||:||||::.|      ||.
  Fly    61 SEERYAEYWQGLAAQTLDQQLESKLRLNTQLARNVMLFIGDGMSIPTITAGRVYLG------GEE 119

  Fly    98 NRLEFEKFNYVGLSKTYCVNKQVADSACTASAYLSGIKANYLTIGVTADVELNDCRGSRLPQNRL 162
            .:..||:|.|||||||||.|.|||||||||:|||.|:||||.||||:|.|:..||:......:.:
  Fly   120 KQFAFEQFPYVGLSKTYCANMQVADSACTATAYLGGVKANYGTIGVSAAVQFKDCQAQAQAAHHV 184

  Fly   163 SSIAAWALKGSKSAGLVTTTRVTHASPAGVYAHTSNRDFESDYDVTKLGQNPGNCPDIAQQLIDG 227
            |||||||.|...:.||||||.||||||||||||.:||::|:|.:|.....:|..|||.|.|||:.
  Fly   185 SSIAAWAQKQGMATGLVTTTSVTHASPAGVYAHLANRNWENDAEVVGDNGDPDLCPDAAAQLINS 249

  Fly   228 DVGKRLRVVMGGGTIKFLPNTTNDVFGNKGQRLDNRNLIEEWQQTKPGNARVVFSRTDLLNNDAQ 292
            .||::|.|:||||...|||....|..|..|:|||.||||:||:.....:|:.|.:|.:|||. :.
  Fly   250 PVGQKLNVIMGGGRENFLPKGVTDSSGAPGRRLDGRNLIDEWKNQHTNSAQYVENRRELLNL-SN 313

  Fly   293 NTDFLLGLFNASHLAYHMDDS-IDTPTLPEMTAAAINVLSRDP--NGYFLFVEGGRIDHAHHETK 354
            :|..:||||...|:|||:|.| .:.|||.||..:|:.:|.|..  .|||||||||||||.||:|.
  Fly   314 HTSRVLGLFAPYHMAYHLDASPAEQPTLEEMVQSAMEILERQSAGRGYFLFVEGGRIDHGHHDTL 378

  Fly   355 AKKALDETVQFSDAVRKARQLTNPWDTLIVVSADHGHTVTISGYPDVNNSIVGLNSELSNVDQLP 419
            |.:|:|||.:|..|||.||..|:..|||||||:||.||::::||....|.|.|:|......|.||
  Fly   379 ALRAIDETAEFDKAVRFARSHTSTDDTLIVVSSDHSHTMSLAGYSSRKNDIFGINDGQLAADDLP 443

  Fly   420 YTSISYANGPAYERFYKSTDGVVERVDLRNLDFSKPDAIYPHGVPMTEETHGGGDVAVYAHVVEY 484
            |.::||||||.|:..|....|.|.|.:||.::....|.::|..||:..|||||.||||:|     
  Fly   444 YATLSYANGPGYDSNYLREGGAVRRKNLRAINMKNKDFMFPSTVPLESETHGGDDVAVFA----- 503

  Fly   485 LLQGPWSHLFTGVYEQSTLPHLMGFASCL 513
              .||::.|||||:||..:||.:|:||||
  Fly   504 --SGPYAQLFTGVFEQHFIPHALGYASCL 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp1NP_001262159.1 alkPPc 65..514 CDD:214515 234/452 (52%)
phuNP_649897.4 alkPPc 93..530 CDD:214515 232/450 (52%)

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