DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp1 and alpl

DIOPT Version :9

Sequence 1:NP_001262159.1 Gene:Alp1 / 40372 FlyBaseID:FBgn0283479 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_957301.2 Gene:alpl / 393982 ZFINID:ZDB-GENE-040420-1 Length:561 Species:Danio rerio


Alignment Length:506 Identity:220/506 - (43%)
Similarity:297/506 - (58%) Gaps:39/506 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PEQSWDLDSISELKSKEFWFHDAQRTLYNKLSTPP-NQYRAKNVIFFLGDGMSVPTVTAGRIFDG 88
            |||.         |..::|...|||:|.:.|.... |:..|||:|.||||||.||||||.||..|
Zfish    57 PEQE---------KRPDYWRDFAQRSLKDALKLQELNKNIAKNIILFLGDGMGVPTVTAARILKG 112

  Fly    89 QLRGVVGERNRLEFEKFNYVGLSKTYCVNKQVADSACTASAYLSGIKANYLTIGVTADVELNDCR 153
            ||.|..||..:||.:||.:|.|||||..|.||.|||.||:|:|.|:|||..|:||:|....:.|.
Zfish   113 QLSGQNGEETQLEMDKFPHVALSKTYNTNAQVPDSAGTATAFLCGVKANEGTVGVSAAAVRSQCN 177

  Fly   154 GSRLPQNRLSSIAAWALKGSKSAGLVTTTRVTHASPAGVYAHTSNRDFESDYDVTKLGQNPGNCP 218
            .::  .|.::||..||....||.|:||||||.||:|:..|||..:||:.||.|:.......| |.
Zfish   178 TTQ--GNEVTSILKWAKDAGKSVGIVTTTRVNHATPSAAYAHCVDRDWYSDADMPNEALQSG-CK 239

  Fly   219 DIAQQLIDG--DVGKRLRVVMGGGTIKFLPNTTNDVF--GNK---GQRLDNRNLIEEW-QQTKPG 275
            |||:||.:.  |:    .|:||||.....|..|.||.  |:|   |.|.|.|||:.|| .:.|..
Zfish   240 DIARQLFENIPDI----NVIMGGGRRSMYPKNTPDVEYPGDKKQNGTRKDGRNLVGEWIDRVKEK 300

  Fly   276 NARVVFSRTDLLNNDAQNTDFLLGLFNASHLAYHMDDSIDT-PTLPEMTAAAINVLSRDPNGYFL 339
            ....|:::.|||:.:..|.|:|||||..:.|.|.::.:.:. |:|.||...||.:|.::..|:||
Zfish   301 RGFYVWNKKDLLSLNPNNVDYLLGLFEPADLNYELERNTENDPSLTEMVDVAIKILKKNERGFFL 365

  Fly   340 FVEGGRIDHAHHETKAKKALDETVQFSDAVRKARQLTNPWDTLIVVSADHGHTVTISGYPDVNNS 404
            .||||||||.|||.|||:||.|.|:...|:.:|..||:.:|||.||:|||.|..:..||....||
Zfish   366 LVEGGRIDHGHHEGKAKQALHEAVEMDRAITRAGLLTSEYDTLTVVTADHSHVFSFGGYTPRGNS 430

  Fly   405 IVGLNSELSNVDQLPYTSISYANGPAYERFYKSTDGVVERVDLRNLDFSKPDAIYPHGVPMTEET 469
            |.||...||:|||.|:|:|.|.|||.    :|..:|..|.|.  .:|:.:.:......||:..||
Zfish   431 IFGLAPTLSDVDQKPFTAILYGNGPG----FKLVNGARENVS--TVDYQQNNYQAQSAVPLRMET 489

  Fly   470 HGGGDVAVYAHVVEYLLQGPWSHLFTGVYEQSTLPHLMGFASCLGPGITYC 520
            |||.|||:::       :||.:||..||.||..:||:|.:|:|:|....:|
Zfish   490 HGGEDVAIFS-------KGPMAHLLHGVQEQHYIPHVMAYAACIGQNKDHC 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp1NP_001262159.1 alkPPc 65..514 CDD:214515 206/457 (45%)
alplNP_957301.2 Alk_phosphatase 88..526 CDD:278666 206/457 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593263
Domainoid 1 1.000 363 1.000 Domainoid score I896
eggNOG 1 0.900 - - E1_COG1785
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 383 1.000 Inparanoid score I2001
OMA 1 1.010 - - QHG48882
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - mtm6481
orthoMCL 1 0.900 - - OOG6_100381
Panther 1 1.100 - - O PTHR11596
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R959
SonicParanoid 1 1.000 - - X159
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.840

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