DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp1 and Alp9

DIOPT Version :9

Sequence 1:NP_001262159.1 Gene:Alp1 / 40372 FlyBaseID:FBgn0283479 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001286944.1 Gene:Alp9 / 38633 FlyBaseID:FBgn0035620 Length:517 Species:Drosophila melanogaster


Alignment Length:500 Identity:235/500 - (47%)
Similarity:323/500 - (64%) Gaps:33/500 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LDSISELKSKEFWFHDAQRTLYNKLSTPPNQYRAKNVIFFLGDGMSVPTVTAGRIFDGQLRGVVG 95
            |.:||..:::|||...:::.:..||....|..:|||:|.||||||.:.|:.|.|.:.|      |
  Fly    42 LRTISGEETQEFWHSASKKLIREKLEFVRNTKKAKNIILFLGDGMGLATLAAARSYIG------G 100

  Fly    96 ERNRLEFEKFNYVGLSKTYCVNKQVADSACTASAYLSGIKANYLTIGVTADVELNDCRGSRLPQN 160
            |..:|.||:|.:.||||||.|:|.|.|||||:::||.|:||||.||||.|.|:..||.......|
  Fly   101 EELKLSFEEFPFTGLSKTYSVDKIVPDSACTSTSYLCGVKANYGTIGVNAHVKRGDCAAMANETN 165

  Fly   161 RLSSIAAWALKGSKSAGLVTTTRVTHASPAGVYAHTSNRDFESDYDVTK-LGQNPGNCPDIAQQL 224
            .:.|:..||:...|:||||||||||||||:|||||.::|::|::..:.: .|:......|||.||
  Fly   166 HVFSLGKWAMDAGKAAGLVTTTRVTHASPSGVYAHVADREWENNAVLEEACGELSDGLQDIAVQL 230

  Fly   225 IDGDVGKRLRVVMGGGTIKFLPNTTNDVFGNKGQRLDNRNLIEEWQQTKPGNARVVFSRTDLLNN 289
            |.|:||.:|:|::|||...|......|    ||:|.|.|||:||::....||. .|.::..|||.
  Fly   231 IHGEVGSKLKVMLGGGKRSFYSPEHYD----KGRRTDGRNLVEEFEALDAGNT-FVKTQKKLLNV 290

  Fly   290 DAQNTDFLLGLFNASHLAYHMDDSID----TPTLPEMTAAAINVLSRDPNGYFLFVEGGRIDHAH 350
            :|..|..|||||:.||:.||::...|    .|||.|||..||.||..:..|||||||||:||.:|
  Fly   291 NATETGRLLGLFSKSHMHYHLEQLADPDNNEPTLEEMTQKAIEVLETEEQGYFLFVEGGKIDISH 355

  Fly   351 HETKAKKALDETVQFSDAVRKARQLTNPWDTLIVVSADHGHTVTISGYPDVNNSIVGLNSELSNV 415
            |||.|:.|||||.:.|.||:|||::|||.:|||||::||.||.::|||....:.|.|. ::.:..
  Fly   356 HETMARIALDETAELSKAVKKAREMTNPEETLIVVTSDHSHTFSVSGYQPRGSDIFGA-AKANGK 419

  Fly   416 DQLPYTSISYANGPAYERFYKSTDGVVERVDLRNL----DFSKPDAIYPHGVPMTEETHGGGDVA 476
            |..||.::|||||.:::.:|.:.  ..||||..:|    ||   |.::|..||:..|||||.||.
  Fly   420 DGKPYLALSYANGKSFQDYYNTE--THERVDPTSLPTIGDF---DQLFPAMVPLESETHGGEDVG 479

  Fly   477 VYAHVVEYLLQGPWSHLFTGVYEQSTLPHLMGFASCLGPGITYCD 521
            |:|       .|||:|||||||||:|:||:|.||:|:|.|:|.||
  Fly   480 VFA-------SGPWAHLFTGVYEQNTIPHMMAFAACVGDGLTACD 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp1NP_001262159.1 alkPPc 65..514 CDD:214515 220/457 (48%)
Alp9NP_001286944.1 PRK10518 12..496 CDD:236706 221/477 (46%)
ALP_like 75..508 CDD:304875 220/456 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466632
Domainoid 1 1.000 363 1.000 Domainoid score I896
eggNOG 1 0.900 - - E1_COG1785
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 383 1.000 Inparanoid score I2001
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - mtm6481
orthoMCL 1 0.900 - - OOG6_100381
Panther 1 1.100 - - P PTHR11596
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X159
1110.800

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