DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp1 and Alp10

DIOPT Version :10

Sequence 1:NP_001262159.1 Gene:Alp1 / 40372 FlyBaseID:FBgn0283479 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_647976.1 Gene:Alp10 / 38632 FlyBaseID:FBgn0035619 Length:524 Species:Drosophila melanogaster


Alignment Length:530 Identity:241/530 - (45%)
Similarity:329/530 - (62%) Gaps:40/530 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LRFFAALALQL---TACSSQYKYGP--EQSWDLDSISELKSKEFWFHDAQRTLYNKLS--TPPNQ 61
            |.|||.|.:|.   .|...::...|  :.|.|.:::.|.....||...||..|.:||:  ...|:
  Fly     8 LCFFALLVIQARSDLADDQEHAQHPRLQSSRDFEALDEELDTRFWHDKAQSILADKLAGHKKLNE 72

  Fly    62 YRAKNVIFFLGDGMSVPTVTAGRIFDGQLRGVVGERNR-LEFEKFNYVGLSKTYCVNKQVADSAC 125
            .||||||.||||||||.|:.|.|.|       :|:.|: :.||||.|:||||||.||::..|||.
  Fly    73 NRAKNVILFLGDGMSVHTIAATRAF-------MGDSNKQVFFEKFPYLGLSKTYAVNERTPDSAN 130

  Fly   126 TASAYLSGIKANYLTIGVTADVELNDCRGSRLPQNRLSSIAAWALKGSKSAGLVTTTRVTHASPA 190
            ||:|||:|:||||.||||.|.|:..||..:  ..:.:.||..||.:..|.||||||.||||||||
  Fly   131 TATAYLTGVKANYGTIGVNAQVQRGDCVTN--SSSHVQSIGQWAQEAGKWAGLVTTARVTHASPA 193

  Fly   191 GVYAHTSNRDFESDYDVTKLGQNPGNCPDIAQQLIDGDVGKRLRVVMGGGTIKFLPNTTNDVFGN 255
            |||||.|.|::|.|.::.....:|....|||:||::..||:.|||:||||...|...:.:|..|.
  Fly   194 GVYAHVSERNWEHDGEIISSKCSPDVNTDIARQLVEWPVGQELRVIMGGGRSYFRDQSQHDETGV 258

  Fly   256 KGQRLDNRNLIEEWQQTKP---GNARVVFSRTDLLNNDAQNTDFLLGLFNASHLAYHMD------ 311
            .|.|.|.|:||.:|::.|.   ...:.|:|...|...|...||:|||||:.|||.||.|      
  Fly   259 SGLRTDGRDLISDWREIKKQQGAEGKYVWSLKGLKETDISKTDYLLGLFDTSHLPYHGDRRRTHY 323

  Fly   312 -DSIDTPTLPEMTAAAINVLSRDPNGYFLFVEGGRIDHAHHETKAKKALDETVQFSDAVRKARQL 375
             |:  .|:|.:||.|||.:||::..|||||||.||||.|||.|||.|||::|.:|:.||..||::
  Fly   324 EDA--EPSLSDMTEAAIKMLSKNEEGYFLFVESGRIDMAHHATKAMKALEDTEEFAAAVELARKM 386

  Fly   376 TNPWDTLIVVSADHGHTVTISGYPDVNNSIVGLNSELSNVDQLPYTSISYANGPAYERFYKSTDG 440
            |:..||||||::||.||::|:|||....:|:.|...|:: |:||:|.:||||||.::..|.:.||
  Fly   387 TDEEDTLIVVTSDHSHTMSINGYPYRRQNILSLAPNLAD-DELPFTILSYANGPGFDDTYSTKDG 450

  Fly   441 VVERVDLRNLDFSKPDAIYPHGVPMTEETHGGGDVAVYAHVVEYLLQGPWSHLFTGVYEQSTLPH 505
               |:||.:.|.:..:..:...||::.||||..||.|:|       .||:.|||||.||||.:|.
  Fly   451 ---RIDLSHADTTSAEFEFQATVPLSSETHGAEDVGVFA-------SGPFEHLFTGNYEQSAIPA 505

  Fly   506 LMGFASCLGP 515
            :|.:|:.:||
  Fly   506 MMAYAANIGP 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp1NP_001262159.1 alkPPc 65..514 CDD:214515 218/459 (47%)
Alp10NP_647976.1 ALP_like 76..514 CDD:474031 218/459 (47%)

Return to query results.
Submit another query.