DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp1 and Alp8

DIOPT Version :9

Sequence 1:NP_001262159.1 Gene:Alp1 / 40372 FlyBaseID:FBgn0283479 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001286709.1 Gene:Alp8 / 37540 FlyBaseID:FBgn0034712 Length:533 Species:Drosophila melanogaster


Alignment Length:517 Identity:227/517 - (43%)
Similarity:314/517 - (60%) Gaps:26/517 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 AALALQLTACSSQYKYGPEQSWDLDSISELKSKEFWFHDAQRTLYNKLSTP-PNQYRAKNVIFFL 71
            ||..|:.:...:..||.|.:..|         .::|::.|...:..:|..| ||..:|||:|.||
  Fly    39 AANKLKFSTDVATEKYTPPEEMD---------PQYWYNIADEEITKRLQLPQPNSQKAKNIIMFL 94

  Fly    72 GDGMSVPTVTAGRIFDGQLRGVVGERNRLEFEKFNYVGLSKTYCVNKQVADSACTASAYLSGIKA 136
            ||||.:.||.|.||..||.:|..||.:.|.||:|.|.|||:|||.|.||.||||||:|||.|:|.
  Fly    95 GDGMPLSTVAAARILKGQRQGNTGEESSLSFERFPYTGLSRTYCSNAQVPDSACTATAYLCGVKT 159

  Fly   137 NYLTIGVTADVELNDCRGSRLPQNRLSSIAAWALKGSKSAGLVTTTRVTHASPAGVYAHTSNRDF 201
            |.:.|||:|.||.|:|..|:.|.|||:|||.||....||.|:||||.:|||||:|.||.|:||.:
  Fly   160 NIVNIGVSAAVEYNNCTASQDPANRLTSIAEWAQNAGKSTGIVTTTTLTHASPSGAYAKTANRMW 224

  Fly   202 ESDYDVTKLGQNPGNCPDIAQQLIDGDVGKRLRVVMGGGTIKFLPNTTNDVFGNKGQRLDNRNLI 266
            |.|.|||..|.:..:|.|:|.||:....||...|:.|||..|||||:..|..||.|:|.|..||:
  Fly   225 ECDTDVTSYGVDANSCIDMATQLVTQTPGKNFEVMFGGGMGKFLPNSIVDSHGNPGERSDGVNLL 289

  Fly   267 EEWQQTKPGNARVVFSRTDLLNNDAQNTDFLLGLFNASHLAYHMD-DSIDTPTLPEMTAAAINVL 330
            ..||....|.. :|.:|..||..:......::|||.:..:.:|:: |....|||.|:|...|..|
  Fly   290 SRWQGLHDGGV-LVTNRNQLLKLNVSAVSSVIGLFQSKLMNFHLEADDTYQPTLSELTEVTIKKL 353

  Fly   331 SRD-PNGYFLFVEGGRIDHAHHETKAKKALDETVQFSDAVRKARQLTNPWDTLIVVSADHGHTVT 394
            |:: .:|||.|:|||.||:.:|.|||..||||.::|..|::.||.:|:..||||||:|||||.|:
  Fly   354 SQNKEHGYFAFIEGGLIDYGNHYTKAGYALDEALEFEKAIQLARDMTDIEDTLIVVTADHGHAVS 418

  Fly   395 ISGYPDVNNSIVGLNSELSNVDQLPYTSISYANGPAYERFYKSTDGVVERVDLRNLDFSKPDAIY 459
            |:|||.....|:|:|...::::.:.|:.::||.||   ..|...:|  :|:.|.:: ....|||.
  Fly   419 IAGYPGRGTPILGINQHDTDINGVQYSVLNYAAGP---NQYLDENG--QRIPLDDI-LGSDDAIT 477

  Fly   460 PHGVPMTEETHGGGDVAVYAHVVEYLLQGPWSHLFTGVYEQSTLPHLMGFASCLGPGITYCD 521
            |..:|..:..|.|.||.::|       .||.|||||||.:|||:||||.:|:|:|.|...||
  Fly   478 PSYIPKDQGVHSGEDVGIFA-------SGPQSHLFTGVMQQSTIPHLMAYAACIGSGKQVCD 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp1NP_001262159.1 alkPPc 65..514 CDD:214515 209/450 (46%)
Alp8NP_001286709.1 ALP_like 88..525 CDD:304875 209/450 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466660
Domainoid 1 1.000 363 1.000 Domainoid score I896
eggNOG 1 0.900 - - E1_COG1785
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I224
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - mtm8903
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11596
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X159
109.900

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