DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp1 and Alpg

DIOPT Version :9

Sequence 1:NP_001262159.1 Gene:Alp1 / 40372 FlyBaseID:FBgn0283479 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_038940610.1 Gene:Alpg / 367308 RGDID:1565100 Length:533 Species:Rattus norvegicus


Alignment Length:500 Identity:219/500 - (43%)
Similarity:288/500 - (57%) Gaps:32/500 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 ELKSKEFWFHDAQRTLYNKLSTPPNQYRAKNVIFFLGDGMSVPTVTAGRIFDGQLRGVVGERNRL 100
            |.::..||...|:..|.......|.:..|||:|.||||||.||||||.||..|||.|.:|....|
  Rat    26 EEENPAFWNQKAKEALDVAKKLKPIRTSAKNLIIFLGDGMGVPTVTATRILKGQLGGHLGPETPL 90

  Fly   101 EFEKFNYVGLSKTYCVNKQVADSACTASAYLSGIKANYLTIGVTADVELNDCRGSRLPQNRLSSI 165
            ..:.|.:..|||||.|::||.|||.||:|||.|:||||.||||:|....|.|..:.  .|.:.|:
  Rat    91 AMDHFPFTALSKTYNVDRQVPDSAGTATAYLCGVKANYKTIGVSAAARFNQCNSTF--GNEVFSV 153

  Fly   166 AAWALKGSKSAGLVTTTRVTHASPAGVYAHTSNRDFESDYDVTKLGQNPGNCPDIAQQLIDG-DV 229
            ...|.|..||.|:||||.|.||||||.||||.|.|:.||..:.......| |.|||.|||.. |:
  Rat   154 MHRAKKAGKSVGVVTTTSVQHASPAGTYAHTVNCDWYSDAHMATAALQEG-CKDIAMQLISNMDI 217

  Fly   230 GKRLRVVMGGGTIKFLPNTTND--VFGNK---GQRLDNRNLIEEWQQTKPGNARVVFSRTDLL-- 287
            .    |::|||.....|..|.|  ..||:   |.|||.:||:::|.....| ||.|::||:|:  
  Rat   218 D----VILGGGRKFMFPKGTPDPEYSGNRAQSGTRLDGQNLVQKWLAKHQG-ARYVWNRTELIQA 277

  Fly   288 NNDAQNTDFLLGLFNASHLAYHM-DDSIDTPTLPEMTAAAINVLSRDPNGYFLFVEGGRIDHAHH 351
            :.|:..| .|:|||..:.:.|.: .|....|:|.|||..|:::|||:|.|::||||||.|||.||
  Rat   278 SQDSAVT-HLMGLFEPNDMKYDIYRDPTQDPSLAEMTEVAVHLLSRNPKGFYLFVEGGHIDHGHH 341

  Fly   352 ETKAKKALDETVQFSDAVRKARQLTNPWDTLIVVSADHGHTVTISGYPDVNNSIVGLNSELSNVD 416
            |:.|.:||.|.|.|..||.||.:||:..||:|:|:|||.|..:..||.....||.||.:..:.:|
  Rat   342 ESIAYRALTEAVMFDSAVDKANKLTSEKDTMILVTADHSHVFSFGGYVPRGTSIFGLGASFNALD 406

  Fly   417 QLPYTSISYANGPAYERFYKSTDGVVERVDLRNLDFSKPDAIYPHGVPMTEETHGGGDVAVYAHV 481
            ..|:|||.|.|||.| :..|.|     |.|:.:.:...|.......||::.|||.|.|||::|  
  Rat   407 GRPFTSILYGNGPGY-KLEKGT-----RPDVTDKESRDPKYRQQAAVPLSSETHSGEDVAIFA-- 463

  Fly   482 VEYLLQGPWSHLFTGVYEQSTLPHLMGFASCLGPGITYCDLQPKA 526
                 :||.:||..||.||:.:.|:|.||.||.| .|.|.|.|.|
  Rat   464 -----RGPQAHLVHGVQEQNYIAHVMAFAGCLEP-YTDCGLAPPA 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp1NP_001262159.1 alkPPc 65..514 CDD:214515 205/457 (45%)
AlpgXP_038940610.1 Alk_phosphatase 54..490 CDD:395188 205/457 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351477
Domainoid 1 1.000 373 1.000 Domainoid score I856
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48882
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100381
Panther 1 1.100 - - O PTHR11596
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X159
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.860

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