DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alp1 and Alp6

DIOPT Version :9

Sequence 1:NP_001262159.1 Gene:Alp1 / 40372 FlyBaseID:FBgn0283479 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_610496.1 Gene:Alp6 / 35981 FlyBaseID:FBgn0033423 Length:515 Species:Drosophila melanogaster


Alignment Length:535 Identity:254/535 - (47%)
Similarity:336/535 - (62%) Gaps:45/535 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ALRFFAALALQLTAC-----SSQYKYGPEQSWDLDS----ISELKSKEFWFHDAQRTLYNKL--- 55
            |.||.  |.|.|..|     |.|..:...:|:|.:|    .:|.:..::|...||..|.:||   
  Fly     2 ARRFI--LLLVLAVCLSGSASGQRDHPRGRSFDAESHPIKYAEEQQTQYWVDKAQAKLLSKLAEQ 64

  Fly    56 -STPPNQYRAKNVIFFLGDGMSVPTVTAGRIFDGQLRGVVGE-RNRLEFEKFNYVGLSKTYCVNK 118
             |...|  :|||||.||||||||.||||       .|.::|: ..::.||.|.|.|||||||||:
  Fly    65 ESATTN--KAKNVILFLGDGMSVHTVTA-------TRNLLGDSAEQVYFEGFPYTGLSKTYCVNR 120

  Fly   119 QVADSACTASAYLSGIKANYLTIGVTADVELNDCRGSRLPQNRLSSIAAWALKGSKSAGLVTTTR 183
            |||||||||:|||.|:||||.||||.|:|....|.|:...::|:.|||.||....|.||||||.|
  Fly   121 QVADSACTATAYLGGVKANYGTIGVNANVSRYSCDGAANEEDRVLSIAHWAQAAGKDAGLVTTAR 185

  Fly   184 VTHASPAGVYAHTSNRDFESDYDVTKLGQNPGNCPDIAQQLIDGDVGKRLRVVMGGGTIKFLPNT 248
            ||||||||||||.::|::|:|::|.....:|....|||:||::..||::|:|::|||...|:..|
  Fly   186 VTHASPAGVYAHIADRNWENDWEVANRECDPEQTIDIARQLVEQPVGQQLKVILGGGRKNFIDAT 250

  Fly   249 TNDVFGNKGQRLDNRNLIEEW-QQTKPGN--ARVVFSRTDLLNNDAQNTDFLLGLFNASHLAYHM 310
            .||..|..|:|.|.|:||..| .|.|..|  |:.|:||..|...|.:|||:|||||...||.|:.
  Fly   251 VNDEEGYPGKRTDGRHLIRSWLDQKKEANVSAKYVWSRKGLSLVDLENTDYLLGLFANDHLPYNG 315

  Fly   311 D-----DSIDTPTLPEMTAAAINVLSRDPNGYFLFVEGGRIDHAHHETKAKKALDETVQFSDAVR 370
            |     ..:..|:|.|:|.|||.||||:..|:||||||.|||.|||:|.||::|::|.:|:.||:
  Fly   316 DRDRKRSQLADPSLSELTEAAITVLSRNDKGFFLFVEGARIDMAHHDTFAKRSLEDTAEFARAVQ 380

  Fly   371 KARQLTNPWDTLIVVSADHGHTVTISGYPDVNNSIVGLNSELSNVDQLPYTSISYANGPAYERFY 435
            |||:||:..||||||:|||.|.::|:|||..:..|.|| ::|:: |.||||.:||||||.|...|
  Fly   381 KARELTSEDDTLIVVTADHAHVMSINGYPYRDQEITGL-AQLAD-DNLPYTILSYANGPGYYSGY 443

  Fly   436 KSTDGVVERVDLRNLDFSKPDAIYPHGVPMTEETHGGGDVAVYAHVVEYLLQGPWSHLFTGVYEQ 500
            ...:|   |..|:....:..|..||...|:..|||||.||||||       .||::..|:|.|||
  Fly   444 NRAEG---RALLKEKLVADSDYQYPTLAPLDAETHGGDDVAVYA-------SGPYAQYFSGNYEQ 498

  Fly   501 STLPHLMGFASCLGP 515
            |.:|.||..|:.:||
  Fly   499 SNIPALMARAAGIGP 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp1NP_001262159.1 alkPPc 65..514 CDD:214515 230/457 (50%)
Alp6NP_610496.1 ALP_like 72..511 CDD:304875 231/457 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466630
Domainoid 1 1.000 363 1.000 Domainoid score I896
eggNOG 1 0.900 - - E1_COG1785
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 383 1.000 Inparanoid score I2001
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - mtm6481
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11596
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X159
109.900

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