DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp1 and Alpl

DIOPT Version :9

Sequence 1:NP_001262159.1 Gene:Alp1 / 40372 FlyBaseID:FBgn0283479 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_037191.2 Gene:Alpl / 25586 RGDID:2100 Length:524 Species:Rattus norvegicus


Alignment Length:520 Identity:223/520 - (42%)
Similarity:304/520 - (58%) Gaps:37/520 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LALQLTACSSQYKYGPEQSWDLDSISELKSKEFWFHDAQRTLYNKLSTPP-NQYRAKNVIFFLGD 73
            |.|.:..|.:. .:.||:.         |...:|...||.||.|.|.... |...|||:|.||||
  Rat     6 LVLAIGTCLTN-SFVPEKE---------KDPSYWRQQAQETLKNALKLQKLNTNVAKNIIMFLGD 60

  Fly    74 GMSVPTVTAGRIFDGQLRGVVGERNRLEFEKFNYVGLSKTYCVNKQVADSACTASAYLSGIKANY 138
            ||.|.||||.||..|||....||..|||.:||.:|.|||||..|.||.|||.||:|||.|:|||.
  Rat    61 GMGVSTVTAARILKGQLHHNTGEETRLEMDKFPFVALSKTYNTNAQVPDSAGTATAYLCGVKANE 125

  Fly   139 LTIGVTADVELNDCRGSRLPQNRLSSIAAWALKGSKSAGLVTTTRVTHASPAGVYAHTSNRDFES 203
            .|:||:|..|...|..::  .|.::||..||....||.|:||||||.||:|:..|||:::||:.|
  Rat   126 GTVGVSAATERTRCNTTQ--GNEVTSILRWAKDAGKSVGIVTTTRVNHATPSAAYAHSADRDWYS 188

  Fly   204 DYDVTKLGQNPGNCPDIAQQLIDGDVGKRLRVVMGGGTIKFLPNTTNDVFGN-----KGQRLDNR 263
            |.::.....:.| |.|||.||:...  |.:.|:||||.....|....||...     :|.|||..
  Rat   189 DNEMPPEALSQG-CKDIAYQLMHNI--KDIDVIMGGGRKYMYPKNRTDVEYELDEKARGTRLDGL 250

  Fly   264 NLIEEWQQTKP--GNARVVFSRTDLLNNDAQNTDFLLGLFNASHLAYHMD-DSIDTPTLPEMTAA 325
            :||..|:..||  .::..|::||:||..|....|:|||||....:.|.:: :::..|:|.||...
  Rat   251 DLISIWKSFKPRHKHSHYVWNRTELLALDPSRVDYLLGLFEPGDMQYELNRNNLTDPSLSEMVEV 315

  Fly   326 AINVLSRDPNGYFLFVEGGRIDHAHHETKAKKALDETVQFSDAVRKARQLTNPWDTLIVVSADHG 390
            |:.:|:::|.|:||.||||||||.|||.|||:||.|.|:..:|:.||..:|:..|||.||:|||.
  Rat   316 ALRILTKNPKGFFLLVEGGRIDHGHHEGKAKQALHEAVEMDEAIGKAGTMTSQKDTLTVVTADHS 380

  Fly   391 HTVTISGYPDVNNSIVGLNSELSNVDQLPYTSISYANGPAYERFYKSTDGVVERVDLRNLDFSKP 455
            |..|..||....|||.||...:|:.|:.|:|:|.|.|||.    ||..||  ||.::..:|::..
  Rat   381 HVFTFGGYTPRGNSIFGLAPMVSDTDKKPFTAILYGNGPG----YKVVDG--ERENVSMVDYAHN 439

  Fly   456 DAIYPHGVPMTEETHGGGDVAVYAHVVEYLLQGPWSHLFTGVYEQSTLPHLMGFASCLGPGITYC 520
            :......||:..|||||.||||:|       :||.:||..||:||:.:||:|.:|||:|..:.:|
  Rat   440 NYQAQSAVPLRHETHGGEDVAVFA-------KGPMAHLLHGVHEQNYIPHVMAYASCIGANLDHC 497

  Fly   521  520
              Rat   498  497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp1NP_001262159.1 alkPPc 65..514 CDD:214515 206/456 (45%)
AlplNP_037191.2 Alk_phosphatase 51..490 CDD:395188 206/456 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351464
Domainoid 1 1.000 373 1.000 Domainoid score I856
eggNOG 1 0.900 - - E1_COG1785
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48882
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - mtm8918
orthoMCL 1 0.900 - - OOG6_100381
Panther 1 1.100 - - O PTHR11596
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X159
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.760

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