DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alp1 and Alp4

DIOPT Version :10

Sequence 1:NP_001262159.1 Gene:Alp1 / 40372 FlyBaseID:FBgn0283479 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_314561.5 Gene:Alp4 / 1275323 VectorBaseID:AGAMI1_006291 Length:574 Species:Anopheles gambiae


Alignment Length:519 Identity:201/519 - (38%)
Similarity:282/519 - (54%) Gaps:57/519 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LKSKEFWFHDAQRTLYNKLSTPPNQYR----AKNVIFFLGDGMSVPTVTAGRIFDGQLRGVVGER 97
            |....||..:|:..|...|....|:..    |||:|.|:||||.:.:::.||||.||..|..||.
Mosquito    42 LDDARFWRRNAETYLKKVLMYDENRRMIPSVAKNIIIFVGDGMGIASLSTGRIFKGQRAGRSGEE 106

  Fly    98 NRLEFEKFNYVGLSKTYCVNKQVADSACTASAYLSGIKANYLTIGVTADVELNDCRGSRLPQNRL 162
            .:|.|:.|...|:||||..::||.|||.||:|..||:|..|..:||...:...:...::||    
Mosquito   107 EQLSFDNFPNTGMSKTYNTDRQVPDSAGTATAMFSGVKTKYGVLGVDYTITETNLEAAKLP---- 167

  Fly   163 SSIAAWALKGSKSAGLVTTTRVTHASPAGVYAHTSNRDFESDYDVTKLGQNPGNCPDIAQQLIDG 227
             |...||.:..|..|:|||||||||:||..|||:.||::|....:....:|  ...|||:|:::.
Mosquito   168 -SFMDWAQEEGKRTGIVTTTRVTHATPAACYAHSINRNYECGAKIPVHLKN--RIKDIARQMMED 229

  Fly   228 DVGKRLRVVMGGGTIKF---LPNTTNDVFGNKG------QRLDNRNLIEEWQQTKPG-NARVVFS 282
            ..||.|.||:|||...|   :||.....:..:|      .|.|.|||:|||:....| ||...:.
Mosquito   230 APGKNLNVVLGGGRNHFGASMPNHLKPEYQFQGAMEKTCMRTDGRNLVEEWKLRWNGTNAAYAWK 294

  Fly   283 RTDLLNNDAQNTDFLLGLFNASHLAYHMDDSI------DTPTLPEMTAAAINVLSR-DPNGYFLF 340
            .:||...:....|.||||||..||:|   |::      ..|:|.|||.|||.||.| |..|:.|.
Mosquito   295 TSDLRAVELDKVDHLLGLFNDDHLSY---DTVRDRTPDGEPSLSEMTEAAIKVLQRPDSAGFALM 356

  Fly   341 VEGGRIDHAHHETKAKKALDETVQFSDAVRKARQLTNPWDTLIVVSADHGHTVTISGYPDVNNSI 405
            |||||||||||:..|..||.|.|:...||..|.:|.:..:|||:|:|||.|.:|.:||||..|.|
Mosquito   357 VEGGRIDHAHHQNHAHLALGEVVELDKAVETALKLVDLDETLIIVTADHSHAMTFNGYPDRGNDI 421

  Fly   406 VGLNSELSNVDQLPYTSISYANGPAYERF--------YKSTDGVVERVDLRNLDFSKPDAIYPH- 461
            :|..   :..:..||.:|:|||||.:.:.        .:|||... .:.|..|  ::.:..|.| 
Mosquito   422 LGFG---NRPNATPYETITYANGPGFLQHRWNSSLLSEESTDWAT-WIKLNQL--NRSEVTYKHL 480

  Fly   462 -GVPMTEETHGGGDVAVYAHVVEYLLQGPWSHLFTGVYEQSTLPHLMGFASCLGPGITY---CD 521
             ..|:.:|||||.||||:|       .||.::|..|.:||:.:.::|.:|.|:||...:   ||
Mosquito   481 SAFPLPDETHGGEDVAVFA-------SGPGANLVRGTFEQNYIAYVMSYAGCMGPAKRFNLACD 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp1NP_001262159.1 alkPPc 65..514 CDD:214515 189/475 (40%)
Alp4XP_314561.5 None

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