DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp1 and LOC1269868

DIOPT Version :10

Sequence 1:NP_001262159.1 Gene:Alp1 / 40372 FlyBaseID:FBgn0283479 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_308522.5 Gene:LOC1269868 / 1269868 VectorBaseID:AGAMI1_010854 Length:571 Species:Anopheles gambiae


Alignment Length:490 Identity:260/490 - (53%)
Similarity:335/490 - (68%) Gaps:23/490 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 KSKEFWFHDAQRTLYNKLSTPPNQYRAKNVIFFLGDGMSVPTVTAGRIFDGQLRGVVGERNRLEF 102
            |:.::|...||..|...|...||:..||||:||||||||:||:.|.|::.||.:|..||.::|.|
Mosquito    92 KTAQYWNIGAQLKLKEHLMRQPNRNIAKNVVFFLGDGMSIPTLAASRMYLGQQQGHTGEESQLSF 156

  Fly   103 EKFNYVGLSKTYCVNKQVADSACTASAYLSGIKANYLTIGVTADVELNDCRGSRLPQNRLSSIAA 167
            |:|..|||.|||||:|||||||||::|||.|:||||.|:||||.|...:|..|..|:|::.||.|
Mosquito   157 EEFPDVGLVKTYCVDKQVADSACTSTAYLCGVKANYATLGVTAAVNYGNCAASNDPRNQVESIMA 221

  Fly   168 WALKGSKSAGLVTTTRVTHASPAGVYAHTSNRDFESDYDVTKLGQNPGNCPDIAQQLIDGDVGKR 232
            ||....|:.|:|||||||||||||.||||||||:|.|.|:.:.|.:|..|||||.|||.||.||:
Mosquito   222 WAQAAGKATGIVTTTRVTHASPAGAYAHTSNRDWECDADIVRSGGDPAQCPDIATQLIYGDTGKQ 286

  Fly   233 LRVVMGGGTIKFLPNTTNDVFGNKGQRLDNRNLIEEWQQTKP-GNARVVFSRTDLLNNDAQNTDF 296
            .||::|||..||||.|..|..|.:|||:|..|||.:|...|| |.||.|.:|.:|:..:....|:
Mosquito   287 FRVILGGGRRKFLPRTMKDEEGIRGQRMDGANLISQWYYGKPLGTARYVSNRQELMALNFTEVDY 351

  Fly   297 LLGLFNASHLAYHMDDSID-TPTLPEMTAAAINVLSRDPNGYFLFVEGGRIDHAHHETKAKKALD 360
            |||||.|.||.:|:|...| .|||.::|.|||..|.:.|.||.||||||:||.|||.|||:|:||
Mosquito   352 LLGLFAADHLKFHLDARPDLDPTLGDLTYAAIRTLEKYPEGYVLFVEGGKIDLAHHFTKARKSLD 416

  Fly   361 ETVQFSDAVRKARQLTNPWDTLIVVSADHGHTVTISGYPDVNNSIVGLNSELSNVDQLPYTSISY 425
            ||||.|:||:.|||||...|||:||:|||.||:|:|||....|.|:||||::|:.|:.|||:::|
Mosquito   417 ETVQLSEAVQVARQLTTQDDTLLVVTADHSHTMTLSGYATRGNDILGLNSQISDGDRKPYTTLAY 481

  Fly   426 ANGPAYERFYKSTDGVV-----ERVDLRNLDFSKPDAIYPHGVPMTEETHGGGDVAVYAHVVEYL 485
            ||||.         |.|     :|.::........|..:|..|||..|||||.|||::|:     
Mosquito   482 ANGPG---------GPVPGPKGQRPNITESMIKDRDFQFPKVVPMKYETHGGDDVALFAY----- 532

  Fly   486 LQGPWSHLFTGVYEQSTLPHLMGFASCLGPGITYC 520
              |||||||.|:|||:.:|||:|:|:|:|.|...|
Mosquito   533 --GPWSHLFGGMYEQNVIPHLIGYAACIGNGEHAC 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp1NP_001262159.1 alkPPc 65..514 CDD:214515 248/455 (55%)
LOC1269868XP_308522.5 None

Return to query results.
Submit another query.