DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp1 and alpl

DIOPT Version :9

Sequence 1:NP_001262159.1 Gene:Alp1 / 40372 FlyBaseID:FBgn0283479 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_031762314.1 Gene:alpl / 100485467 XenbaseID:XB-GENE-1010301 Length:527 Species:Xenopus tropicalis


Alignment Length:506 Identity:227/506 - (44%)
Similarity:294/506 - (58%) Gaps:37/506 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PEQSWDLDSISELKSKEFWFHDAQRTLYNKLSTPPNQYR--AKNVIFFLGDGMSVPTVTAGRIFD 87
            |||.         |..::|...||.||.:.|....|...  |||||.||||||.||||||.||..
 Frog    20 PEQE---------KDPKYWRRQAQDTLRDALLLLQNLNTNVAKNVIMFLGDGMGVPTVTATRILK 75

  Fly    88 GQLRGVVGERNRLEFEKFNYVGLSKTYCVNKQVADSACTASAYLSGIKANYLTIGVTADVELNDC 152
            ||:.|..||..:||.:||.:|.|||||..|.||.|||.||:|||.|:|||..|:||.|......|
 Frog    76 GQMAGQPGEETQLEMDKFPHVALSKTYNTNAQVPDSAGTATAYLCGVKANEGTVGVNAAAVRGQC 140

  Fly   153 RGSRLPQNRLSSIAAWALKGSKSAGLVTTTRVTHASPAGVYAHTSNRDFESDYDVTKLGQNPGNC 217
            ..:|  .|.:.||..||.:..||.|:|||||:.||:|:..|||..|||:.||.::.|.....| |
 Frog   141 NTTR--GNEVDSILKWAKQAGKSVGVVTTTRINHATPSAAYAHCVNRDWYSDLEMPKEAVEQG-C 202

  Fly   218 PDIAQQLIDGDVGKRLRVVMGGGTIKFLPNTTNDV-FGN----KGQRLDNRNLIEEWQQTKPGN- 276
            .|||.||:..  ...:.|:||||.....|..|:|| :.|    .|.|||..||.:.|...||.. 
 Frog   203 KDIAWQLMHN--VPNIEVIMGGGRKYMYPRNTSDVEYPNDDKASGTRLDGLNLTQIWLDQKPNKQ 265

  Fly   277 -ARVVFSRTDLLNNDAQNTDFLLGLFNASHLAYHMD-DSIDTPTLPEMTAAAINVLSRDPNGYFL 339
             ||.|::|..||:.:.|..|.|||||....:.|.:: ::...|:||||...||.:|.::|.|:||
 Frog   266 AARYVWNRQQLLSVNPQEVDHLLGLFEPIDMLYELERNTTMDPSLPEMVEMAIKILRKNPEGFFL 330

  Fly   340 FVEGGRIDHAHHETKAKKALDETVQFSDAVRKARQLTNPWDTLIVVSADHGHTVTISGYPDVNNS 404
            .||||||||.|||.||.:||.|.||...|:..|..:|:..|||.||:|||.|..|..||.....|
 Frog   331 LVEGGRIDHGHHEGKANQALHEAVQMDIAIGLAGSMTSEEDTLTVVTADHSHVFTFGGYTHRGTS 395

  Fly   405 IVGLNSELSNVDQLPYTSISYANGPAYERFYKSTDGVVERVDLRNLDFSKPDAIYPHGVPMTEET 469
            |.||...:|:|||.|:|||.|.|||.    ||..:|  :|.::..:|||.|:.:....||:..||
 Frog   396 IFGLAPAVSDVDQKPFTSILYGNGPG----YKLVNG--QRENVSTVDFSHPNYLAQSAVPLRMET 454

  Fly   470 HGGGDVAVYAHVVEYLLQGPWSHLFTGVYEQSTLPHLMGFASCLGPGITYC 520
            |||.||||:|       :||.:||..||:||:.:||:|.:|:|:|....:|
 Frog   455 HGGEDVAVFA-------KGPMAHLLHGVHEQNYIPHVMAYAACIGQNQDHC 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp1NP_001262159.1 alkPPc 65..514 CDD:214515 213/456 (47%)
alplXP_031762314.1 Alk_phosphatase 52..491 CDD:395188 213/456 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 372 1.000 Domainoid score I883
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 382 1.000 Inparanoid score I2005
OMA 1 1.010 - - QHG48882
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - mtm9329
Panther 1 1.100 - - O PTHR11596
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R959
SonicParanoid 1 1.000 - - X159
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.110

Return to query results.
Submit another query.