DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aef1 and CG4360

DIOPT Version :10

Sequence 1:NP_001262157.1 Gene:Aef1 / 40370 FlyBaseID:FBgn0005694 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster


Alignment Length:486 Identity:132/486 - (27%)
Similarity:173/486 - (35%) Gaps:189/486 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 GPPSVPPPPTEL----PLPFQMH-LSGISAEAHSAAQAAAMAAAQAAAAQAAAAEQQQPPPPTSH 138
            ||.|....||.|    ..||.:| |:.:.|..|...||                 ...|..|..|
  Fly    48 GPNSGQQQPTTLASLQQSPFALHQLTAVQAIQHPTHQA-----------------MLHPQHPLVH 95

  Fly   139 LTHLTTHSPTTIHSEHYLANGHSEHPGEGNAAVGVGGA---------------------VREPEK 182
            |..::|   ||                 .|:..|.||:                     |.:|.|
  Fly    96 LLDIST---TT-----------------ANSGGGGGGSHTPISPMKQEVQSVISEEEVVVDDPRK 140

  Fly   183 PFHCTVCDRRFRQLSTLTNHVKIHTGEKPYKCNVCDKTFRQSSTLTNHLKIHTGEKPYNCNFCPK 247
            ...|.||..:||||:||.||:||||.|:||||..|||.|||.||||||:||||||||:.||.|.|
  Fly   141 KKQCHVCKNKFRQLTTLRNHMKIHTDERPYKCKHCDKAFRQISTLTNHVKIHTGEKPFTCNICAK 205

  Fly   248 HFRQLSTLANHVKIH-----------------TGE------------------------------ 265
            .|||.|||.||:|.|                 ||.                              
  Fly   206 DFRQQSTLINHIKTHKAAESSTPTSLLNYQPQTGSGKHRKSQMHQAYQQQHQRVQISKTLYSGSY 270

  Fly   266 ---------KPFECVICKKQFRQSSTLNNHIKIHVMDKVYVPVKIKTEEDEGXLGRMPLAAHH-- 319
                     |||:|.:||::|.|.|||:||.:.|:..|.|     |.|..:. ..::...|:|  
  Fly   271 SSPAAEELVKPFQCSVCKRRFPQLSTLHNHERTHIDPKPY-----KCETCDKSFSQLATLANHKK 330

  Fly   320 -------------HQQQQHQ----HHHQQQQHQ---------------------HHPPPPSQQQQ 346
                         |.|.:.|    :|.:...||                     |..|.|.....
  Fly   331 IHTGDKPYTCSYCHMQFRQQSTLTNHLKTHTHQIAPGGVGGAGGGGGAVTATVDHSMPAPLAPGT 395

  Fly   347 QHIDQRGVTITTLP------SATTVAQHHQQHQHIQDGSPHHHFNVAALGDLSSAMQLGAVTADG 405
            |.:     |...||      :|..:...|....|..|||.          .:||.:...|.....
  Fly   396 QQL-----TSGLLPNNLHGSTANIIQLDHHPLLHFLDGST----------TVSSVVATAAANTKV 445

  Fly   406 SFVTMGGVVVGRIQHTREELQQLGVIKVESP 436
            .....||...||:    ..:..:.::|.::|
  Fly   446 EHFQAGGSPSGRM----TVVGTINMLKGDNP 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aef1NP_001262157.1 C2H2 Zn finger 186..206 CDD:275368 12/19 (63%)
zf-H2C2_2 199..223 CDD:463886 16/23 (70%)
C2H2 Zn finger 214..234 CDD:275368 14/19 (74%)
zf-H2C2_2 227..251 CDD:463886 17/23 (74%)
C2H2 Zn finger 242..262 CDD:275368 13/19 (68%)
zf-H2C2_2 255..279 CDD:463886 14/79 (18%)
C2H2 Zn finger 270..290 CDD:275368 10/19 (53%)
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 12/19 (63%)
zf-H2C2_2 157..181 CDD:463886 16/23 (70%)
C2H2 Zn finger 172..192 CDD:275368 14/19 (74%)
C2H2 Zn finger 200..220 CDD:275368 13/19 (68%)
zf-C2H2_8 281..366 CDD:464935 25/89 (28%)
C2H2 Zn finger 284..304 CDD:275368 10/19 (53%)
C2H2 Zn finger 312..332 CDD:275368 3/19 (16%)
zf-H2C2_2 325..349 CDD:463886 4/23 (17%)
C2H2 Zn finger 340..360 CDD:275368 4/19 (21%)
C2H2 Zn finger 478..498 CDD:275368
C2H2 Zn finger 506..526 CDD:275368
zf-H2C2_2 519..543 CDD:463886
C2H2 Zn finger 534..554 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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