DRSC/TRiP Functional Genomics Resources

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Protein Alignment barc and HTATSF1

DIOPT Version :9

Sequence 1:NP_649313.1 Gene:barc / 40369 FlyBaseID:FBgn0037081 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001156752.1 Gene:HTATSF1 / 27336 HGNCID:5276 Length:755 Species:Homo sapiens


Alignment Length:414 Identity:179/414 - (43%)
Similarity:250/414 - (60%) Gaps:37/414 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 DEQKKWVPKHPNPGQEGVCGVDEHGE-----RTYTDKDGVEFFWDATKSAWFPKIDDDFMARYQM 210
            |||.:....: ..|::|....|..||     :..||   ..:.||..|.||||||.:||:|.||.
Human    13 DEQLRMQELY-GDGKDGDTQTDAGGEPDSLGQQPTD---TPYEWDLDKKAWFPKITEDFIATYQA 73

  Fly   211 NYGFIDNTSAGEKEKAEKEAAEAKRKEEELKRMTAEAEAAMSRDNPASSAAVPTGKRKAQEPPK- 274
            ||||           :...|:.:....|::...|||       :.|...|..||..||..|..| 
Human    74 NYGF-----------SNDGASSSTANVEDVHARTAE-------EPPQEKAPEPTDARKKGEKRKA 120

  Fly   275 ---WFEMDPLQNTKVYVSNLPLDITMDEFADLMGKCGMVMRDPQTQKFKLKLYAEKDGQIKGDGL 336
               ||.::..:||.||||.||.|||:|||..||.|.|::||||||::||:|||.:..|.:|||||
Human   121 ESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQGNLKGDGL 185

  Fly   337 CDYIKVESVNLALKILDEYNLRGHKIRVQRAQFQMRGEYNPALKPKRKKKDKEKLQKMKEKLFDW 401
            |.|:|.|||.||||:|||..:||:|:.|:.|:||::|||: |.|.|:|.||.:|...|::|..||
Human   186 CCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYD-ASKKKKKCKDYKKKLSMQQKQLDW 249

  Fly   402 RPDKLRG-ERSKNEKTVIIKNLFTPELFEKEVELILEYQNNLREECSKCGMVRKVVIYDRHPDGV 465
            ||::..| .|.::|:.|||||:|.|..||.:..::.|.:.:||.||||.|.:||::::|||||||
Human   250 RPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGV 314

  Fly   466 AQINMASPEEADLVIQMMQGRYFGQRQLSAEAWDGKTKYKIEESAVEAHERLSKWDEFLAEEETD 530
            |.::...|||||..||.:.||:||.||::|:||||.|.|::||::.|..|||..|:.||...|  
Human   315 ASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSREREERLRGWEAFLNAPE-- 377

  Fly   531 KKASEDMKEEDVDSPENQLLPGDA 554
              |:..::..|..|...:..|..|
Human   378 --ANRGLRRSDSVSASERAGPSRA 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
barcNP_649313.1 RRM1_TatSF1_like 283..373 CDD:240727 55/89 (62%)
RRM2_TatSF1_like 414..504 CDD:240728 47/89 (53%)
HTATSF1NP_001156752.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 10/43 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..122 13/47 (28%)
RRM1_TatSF1_like 132..222 CDD:409723 55/89 (62%)
RRM2_TatSF1_like 263..353 CDD:409724 47/89 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 380..415 4/20 (20%)
Mediates interaction with the P-TEFb complex 381..755 4/19 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 433..755
2A1904 <451..715 CDD:273344
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156939
Domainoid 1 1.000 72 1.000 Domainoid score I9387
eggNOG 1 0.900 - - E1_KOG1548
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1542889at2759
OrthoFinder 1 1.000 - - FOG0005218
OrthoInspector 1 1.000 - - oto90821
orthoMCL 1 0.900 - - OOG6_102631
Panther 1 1.100 - - LDO PTHR15608
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1576
SonicParanoid 1 1.000 - - X5592
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.740

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