DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgn and Klrb1b

DIOPT Version :9

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_085102.4 Gene:Klrb1b / 80782 MGIID:107539 Length:223 Species:Mus musculus


Alignment Length:154 Identity:33/154 - (21%)
Similarity:58/154 - (37%) Gaps:41/154 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 CPPKF--HRVGTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRLFLQKQ-------DA 118
            ||..:  ||  ..|:.:....::|.|....|..|.|.|            |.:|.|       |:
Mouse    94 CPQDWLSHR--DKCFHVSQVSNTWKECRIDCDKKGATL------------LLIQDQEELRFLLDS 144

  Fly   119 LSGENDPIWLGATYDHHNNRWQWSMSGRNLSTDSFSRTDSAYVQLISNSQPLDNNCAIYDPSLKY 183
            :..:.:..|:|.:|...:..|:| ::|...::|....|....          :.:||.....   
Mouse   145 IKEKYNSFWIGLSYTLTDMNWKW-INGTAFNSDVLKITGVTE----------NGSCAAISGE--- 195

  Fly   184 RWSARPCSDKLRFICQ----HKMP 203
            :.::..||...|:|||    |:.|
Mouse   196 KVTSEGCSSDNRWICQKELNHETP 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057 27/136 (20%)
GBP_C <414..508 CDD:303769
TPH 421..756 CDD:290579
coiled coil 483..494 CDD:293879
Klrb1bNP_085102.4 ITIM motif 6..11
LCK-binding motif 32..35
CLECT_NK_receptors_like 94..212 CDD:153063 30/145 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841916
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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