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Protein Alignment rgn and LOC690020
DIOPT Version :9
Sequence 1: | NP_001246866.1 |
Gene: | rgn / 40368 |
FlyBaseID: | FBgn0261258 |
Length: | 808 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_001072955.4 |
Gene: | LOC690020 / 690020 |
RGDID: | 1585190 |
Length: | 320 |
Species: | Rattus norvegicus |
Alignment Length: | 155 |
Identity: | 36/155 - (23%) |
Similarity: | 56/155 - (36%) |
Gaps: | 41/155 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 59 VYALCPPKFHRVGTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRLFLQKQDALSGEN 123
|:..| .|..||..:..:..|.|....|:....:|.......:.| ||| |....
Rat 193 VHLFC------CGIKCYYFIMDKKQWKECEQACQGCKLSLLTIDDEDELK---FLQ----LQVTP 244
Fly 124 DPIWLGATYDH--HNNRW-QWSMSGRNLSTDSFSRTDSAYVQL----ISNSQPLDNNCAIYDPSL 181
|..|:|.:||: |::.| ..:.|...|:...:...|..:|.| :.||:
Rat 245 DSYWIGLSYDNKKHDSAWIDNNPSKFALNIKKYYVKDENFVFLSKTRLGNSK------------- 296
Fly 182 KYRWSARPCSDKLRFICQHKMPKVS 206
|.|..|| ||:.::.|.|
Rat 297 --RESVYPC------ICEKRLDKSS 313
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166345267 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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