DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgn and Klrg2

DIOPT Version :10

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:XP_001072378.2 Gene:Klrg2 / 689885 RGDID:1587495 Length:389 Species:Rattus norvegicus


Alignment Length:136 Identity:31/136 - (22%)
Similarity:44/136 - (32%) Gaps:24/136 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 CPPKFHRVGTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRLFLQKQDALSGENDPIW 127
            ||..:......||.|.::...|..:..||....|.|.......|     ||:|.....|.    |
  Rat   273 CPQGWMWSQEHCYYLSEEVQDWESSQAFCSAHQATLPLLNHTQD-----FLRKYQVTKGS----W 328

  Fly   128 LGATYDHHNNRWQWSMSGRNLSTDSFSRTDSAYVQLISNSQPLDNNCAIYDPSLKYRWSARPCSD 192
            :||......  |.|        ||........::: .|...| |.:|...:..   |..|..||.
  Rat   329 VGARRGPEG--WHW--------TDGVPLPSQLFLE-DSEDHP-DFSCGGLEEG---RLVALDCSS 378

  Fly   193 KLRFIC 198
            ...::|
  Rat   379 PRPWVC 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057 29/125 (23%)
Smc <405..>673 CDD:440809
CCDC47 <732..783 CDD:480722
Klrg2XP_001072378.2 PHA03247 <4..191 CDD:223021
CLECT_NK_receptors_like 273..386 CDD:153063 31/136 (23%)
Blue background indicates that the domain is not in the aligned region.

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