DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgn and KLRF1

DIOPT Version :9

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_057607.1 Gene:KLRF1 / 51348 HGNCID:13342 Length:231 Species:Homo sapiens


Alignment Length:139 Identity:28/139 - (20%)
Similarity:58/139 - (41%) Gaps:20/139 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LCPPKFHRVGTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRLFLQKQDALSGENDPI 126
            ||..::.:....||...::..||.:::.:|.::.::|..  .| |:....|:||.   ..:.:.:
Human   113 LCQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLI--IH-DQLEMAFIQKN---LRQLNYV 171

  Fly   127 WLGATYDHHNNRWQWSMSGRNLSTDSFSRTDSAYVQLISNSQPLDNNCAIYDPSLKYRWSARPCS 191
            |:|..:......|.| :.|..:.:..|          .......:|:||....|..:   :..||
Human   172 WIGLNFTSLKMTWTW-VDGSPIDSKIF----------FIKGPAKENSCAAIKESKIF---SETCS 222

  Fly   192 DKLRFICQH 200
            ...::|||:
Human   223 SVFKWICQY 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057 25/125 (20%)
GBP_C <414..508 CDD:303769
TPH 421..756 CDD:290579
coiled coil 483..494 CDD:293879
KLRF1NP_057607.1 CLECT_NK_receptors_like 114..230 CDD:153063 25/135 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151800
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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