DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgn and CLEC1A

DIOPT Version :10

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:XP_011518989.1 Gene:CLEC1A / 51267 HGNCID:24355 Length:307 Species:Homo sapiens


Alignment Length:145 Identity:31/145 - (21%)
Similarity:54/145 - (37%) Gaps:24/145 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 CPP-----KFHRVGTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRLFLQKQDALSGE 122
            |.|     |:|  |.:||.......||.:..:||..:|:.:.:..|..|    |......:.|..
Human   161 CSPCTEQWKWH--GDNCYQFYKDSKSWEDCKYFCLSENSTMLKINKQED----LEFAASQSYSEF 219

  Fly   123 NDPIWLGATYDHHNNRWQWSMSGRNLSTDSFSRTDSAYVQLISNSQPLDNNC-AIYDPSLKYRWS 186
            ....|.|.........|.| |.|...:::.|.       .:|..:.|...:| ||.:..:    .
Human   220 FYSYWTGLLRPDSGKAWLW-MDGTPFTSELFH-------IIIDVTSPRSRDCVAILNGMI----F 272

  Fly   187 ARPCSDKLRFICQHK 201
            ::.|.:..|.:|:.:
Human   273 SKDCKELKRCVCERR 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057 26/126 (21%)
Smc <405..>673 CDD:440809
CCDC47 <732..783 CDD:480722
CLEC1AXP_011518989.1 CLECT_NK_receptors_like 164..286 CDD:153063 29/139 (21%)
Blue background indicates that the domain is not in the aligned region.

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