DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgn and Klri2

DIOPT Version :9

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_001012666.1 Gene:Klri2 / 503650 RGDID:1359205 Length:247 Species:Rattus norvegicus


Alignment Length:147 Identity:28/147 - (19%)
Similarity:57/147 - (38%) Gaps:37/147 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LCPPKFHRVGTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHAD-RKLRLFLQKQDALSGENDP 125
            ||...:...|.:.|.......:|.|:...|::.|:.|.:....|: ..|.||     .::|    
  Rat   131 LCSHDWIAFGNNFYLFFRGTKTWAESKSACEELNSYLLDIDSRAELENLLLF-----EING---- 186

  Fly   126 IWLGATYDHHNNRWQWSMSGRNLSTDSFSRT-DSAYVQ----LISNSQPLDNNCAIYDPSLKYRW 185
                           |.:    ..||:.:|: ...|::    |.::|:..:::|.....:   ::
  Rat   187 ---------------WIL----FKTDAINRSLRKNYIKIHQTLFNDSEKKNHSCHYLSGN---QF 229

  Fly   186 SARPCSDKLRFICQHKM 202
            ||..||.|..:.|:..:
  Rat   230 SAGDCSSKKAYTCEFNL 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057 25/131 (19%)
GBP_C <414..508 CDD:303769
TPH 421..756 CDD:290579
coiled coil 483..494 CDD:293879
Klri2NP_001012666.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39
CLECT 132..243 CDD:321932 26/141 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345307
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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