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Protein Alignment rgn and Clec1a
DIOPT Version :9
Sequence 1: | NP_001246866.1 |
Gene: | rgn / 40368 |
FlyBaseID: | FBgn0261258 |
Length: | 808 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001102723.1 |
Gene: | Clec1a / 500337 |
RGDID: | 1566110 |
Length: | 269 |
Species: | Rattus norvegicus |
Alignment Length: | 151 |
Identity: | 28/151 - (18%) |
Similarity: | 51/151 - (33%) |
Gaps: | 31/151 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 63 CPPKFHRVGTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRLFLQKQ------DALSG 121
||.|:...|..||....:..:|....:||...||.: |::..|:: .:.|.
Rat 136 CPEKWKWHGNKCYQFYKESKTWQSCEYFCLADNATM----------LKISTQEELDFAMPQSYSE 190
Fly 122 ENDPIWLGATYDHHNNRWQWSMSGRNLSTDSFSRTDSAYVQLISNSQPLDNNCAIYDPSLKYRWS 186
.....|.|.:.:.....|.| ||....:...:..:|..:.....:|........|
Rat 191 FFYSYWTGLSRNGSGKAWLW--------TDGTPYSFELFEIIIDPTNLRSRDCMTIFNGKAY--- 244
Fly 187 ARPCSDKLRFICQHKMPKVSG 207
::.|.:..|..|: :|:|
Rat 245 SKDCKELRRCACE----RVAG 261
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166345294 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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