DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rgn and OLR1

DIOPT Version :9

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_002534.1 Gene:OLR1 / 4973 HGNCID:8133 Length:273 Species:Homo sapiens


Alignment Length:141 Identity:37/141 - (26%)
Similarity:54/141 - (38%) Gaps:15/141 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 ALCPPKFHRVGTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRLFLQKQDALSGENDP 125
            |.||..:...|.:||.......:|.::...|...:|.|.:....||..   |:|:  |:|..:.|
Human   142 APCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLD---FIQQ--AISYSSFP 201

  Fly   126 IWLGATYDHHNNRWQWSMSGRNLSTDSFSRTDSAYVQLISNSQPLDNNCAIYDPSLKYRWSARPC 190
            .|:|.:..:.:..|.|. .|..|....| |...|    :|.:.| ...||.......|   |..|
Human   202 FWMGLSRRNPSYPWLWE-DGSPLMPHLF-RVRGA----VSQTYP-SGTCAYIQRGAVY---AENC 256

  Fly   191 SDKLRFICQHK 201
            ......|||.|
Human   257 ILAAFSICQKK 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057 31/125 (25%)
GBP_C <414..508 CDD:303769
TPH 421..756 CDD:290579
coiled coil 483..494 CDD:293879
OLR1NP_002534.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Neck 58..150 3/7 (43%)
SMC_N <73..>137 CDD:330553
CLECT_NK_receptors_like 144..266 CDD:153063 34/136 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151780
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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