DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment rgn and Ly49s4

DIOPT Version :9

Sequence 1:	NP_001246866.1	Gene:	rgn / 40368	FlyBaseID:	FBgn0261258	Length:	808	Species:	Drosophila melanogaster
Sequence 2:	NP_001009487.1	Gene:	Ly49s4 / 494195	RGDID:	1549723	Length:	277	Species:	Rattus norvegicus

Alignment Length:	142	Identity:	32/142 - (22%)
Similarity:	50/142 - (35%)	Gaps:	29/142 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    71 GTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRL-FLQKQDALSGENDPIWLGATYDH 134
            |..||........|.|    ||....|.:......|.|..| ||  ||.:..:|  .|:|::|::
  Rat   149 GIKCYYFTMDIRIWRE----CKQTCQNYSLSFLKIDVKDELKFL--QDHIIRDN--YWIGSSYNN 205

  Fly   135 HNNRWQWSMSGRNLSTDSFSRTD---SAYVQLISNSQPLDNNCAIYDPSLKYRWSARPCSDKLRF 196
            ....|.| :.....:.|..:|..   :.|....|.:...|::                |..:...
  Rat   206 KKKEWSW-IDNSPFNLDFVARNSLRKTGYCMYFSMAGLHDDD----------------CGKRYLC 253

  Fly   197 ICQHKMPKVSGP 208
            ||:..|.|:..|
  Rat   254 ICEKGMDKIPAP 265

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
rgn	NP_001246866.1	CLECT	74..200	CDD:153057	28/129 (22%)
		GBP_C	<414..508	CDD:303769
		TPH	421..756	CDD:290579
		coiled coil	483..494	CDD:293879
Ly49s4	NP_001009487.1	Ly49	38..155	CDD:285577	3/5 (60%)
Ly49s4	NP_001009487.1	CLECT_NK_receptors_like	142..257	CDD:153063	29/132 (22%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166345271
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930