DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rgn and KLRC1

DIOPT Version :9

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_002250.2 Gene:KLRC1 / 3821 HGNCID:6374 Length:233 Species:Homo sapiens


Alignment Length:151 Identity:33/151 - (21%)
Similarity:59/151 - (39%) Gaps:25/151 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 TSRPKRRVYALCPPKFHRVGTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRLFLQKQ 116
            |...|.|....||.::......||.:..:|.:|.|:...|..||::|.......:.|.       
Human   108 TRTQKARHCGHCPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKF------- 165

  Fly   117 DALSGENDPIWLGATYDHHNNRWQWSMSGRNLSTDSFSRTDSAYVQLISNSQPLDNNCAIYDPSL 181
              ||..:...|:|...:..::.|. :|:|            .|:...|.:|...:.|||:...: 
Human   166 --LSIISPSSWIGVFRNSSHHPWV-TMNG------------LAFKHEIKDSDNAELNCAVLQVN- 214

  Fly   182 KYRWSARPCSDKLRFICQHKM 202
              |..:..|...:.:.|:||:
Human   215 --RLKSAQCGSSIIYHCKHKL 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057 26/125 (21%)
GBP_C <414..508 CDD:303769
TPH 421..756 CDD:290579
coiled coil 483..494 CDD:293879
KLRC1NP_002250.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
Immunoreceptor tyrosine-based inhibition motif (ITIM). /evidence=ECO:0000269|PubMed:12165520 6..11
Immunoreceptor tyrosine-based inhibition motif (ITIM). /evidence=ECO:0000269|PubMed:12165520 38..43
CLECT_NK_receptors_like 119..231 CDD:153063 28/136 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151801
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.