DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgn and KLRB1

DIOPT Version :9

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_002249.1 Gene:KLRB1 / 3820 HGNCID:6373 Length:225 Species:Homo sapiens


Alignment Length:217 Identity:49/217 - (22%)
Similarity:82/217 - (37%) Gaps:44/217 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KMWCCQVFILALFAHTIAVEFHGSAARAEINFEGPSPAHSQDTAAPTSRPKRRVYALCPPKFHRV 70
            |:.|..:.:|.|....::|.......::.|  |..|....|.....|.||.   ...||..:.::
Human    42 KLSCAGIILLVLVVTGLSVSVTSLIQKSSI--EKCSVDIQQSRNKTTERPG---LLNCPIYWQQL 101

  Fly    71 GTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRLFLQKQDALSGENDPI-------WL 128
            ...|.......:.|..:...|..|.::|            |.::.:|.|....:.|       |:
Human   102 REKCLLFSHTVNPWNNSLADCSTKESSL------------LLIRDKDELIHTQNLIRDKAILFWI 154

  Fly   129 GATYDHHNNRWQWSMSGRNL-STDSFSRTDSAYVQLISNSQPLDNNCAIYDPSLKYRWSARPCSD 192
            |..:......|:| ::|..| |.|...|.|:.....||.||     .::|.   :|      ||.
Human   155 GLNFSLSEKNWKW-INGSFLNSNDLEIRGDAKENSCISISQ-----TSVYS---EY------CST 204

  Fly   193 KLRFICQHKMPKVSGPNRYKIY 214
            ::|:|||.::.    |.|.|:|
Human   205 EIRWICQKELT----PVRNKVY 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057 30/133 (23%)
GBP_C <414..508 CDD:303769
TPH 421..756 CDD:290579
coiled coil 483..494 CDD:293879
KLRB1NP_002249.1 CLECT_NK_receptors_like 94..212 CDD:153063 32/144 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151795
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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