DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgn and Klri2

DIOPT Version :9

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_796129.2 Gene:Klri2 / 320407 MGIID:2443965 Length:248 Species:Mus musculus


Alignment Length:143 Identity:28/143 - (19%)
Similarity:56/143 - (39%) Gaps:35/143 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 CPPKFHRVGTDCYSLVDQRS-SWLEAHFFCKDKNANLTEPGKHADRKLRLFLQKQDALSGENDPI 126
            |...:...|.:.|.:..:.| :|:|:...|::.|::|......|:.: .|.|.:.|.        
Mouse   132 CSSDWIAFGNNFYCVFRENSKTWVESQSACEELNSHLVIIDSKAEVE-NLLLFEMDG-------- 187

  Fly   127 WLGATYDHHNNRWQWSMSGRNLSTDSFSRTDSAYVQLISNSQPLDNNC-----AIYDPSLKYRWS 186
            |:....|..|:...|....:..:|            |:::|:..:::|     .|:.|.      
Mouse   188 WILHRMDGTNSSRLWGNDIKIRNT------------LMNDSEKKNHSCHYLRGNIFMPD------ 234

  Fly   187 ARPCSDKLRFICQ 199
              .||.|..:||:
Mouse   235 --ECSAKKTYICE 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057 26/132 (20%)
GBP_C <414..508 CDD:303769
TPH 421..756 CDD:290579
coiled coil 483..494 CDD:293879
Klri2NP_796129.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..44
CLECT_NK_receptors_like 132..245 CDD:153063 27/141 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841908
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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