DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgn and Klre1

DIOPT Version :9

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:XP_006506184.1 Gene:Klre1 / 243655 MGIID:2662547 Length:252 Species:Mus musculus


Alignment Length:191 Identity:35/191 - (18%)
Similarity:64/191 - (33%) Gaps:43/191 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CCQVFILALFAHTIAVEFHGSAARAEINFEGPSPAHSQDTAAPTSRPKRRVYALCPPKFHRVGTD 73
            |..:..:|:...|...:.....:.:.|..||                   ::..||..:......
Mouse   104 CLLLMAVAMVMTTFTTKSSSERSSSTIQQEG-------------------LHHPCPENWVWFRCS 149

  Fly    74 CYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRLFLQKQDALSGENDPIWLGATYDHHNNR 138
            ||....:...|.::...|...|::|....|   .::..|..|..        .|:|..|:....:
Mouse   150 CYFFSKEELIWRDSQRACLSLNSSLIRMNK---EEMNFFSLKSF--------FWVGVYYNETRRQ 203

  Fly   139 WQWSMSGRNLSTDSFSRTDSAYVQLISNSQPLDNNCAIYDPSLKYRWSARPCSDKLRFICQ 199
            |.|. ....|.:..||:.::          .:.|.||.|  ..|..:....|::||.:||:
Mouse   204 WLWE-DHSVLPSGLFSKLEA----------NMKNFCASY--KSKEAYMEENCANKLTYICK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057 27/126 (21%)
GBP_C <414..508 CDD:303769
TPH 421..756 CDD:290579
coiled coil 483..494 CDD:293879
Klre1XP_006506184.1 CLECT_NK_receptors_like 139..252 CDD:153063 29/137 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841910
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_119449
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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