DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rgn and FCER2

DIOPT Version :9

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_001207429.1 Gene:FCER2 / 2208 HGNCID:3612 Length:321 Species:Homo sapiens


Alignment Length:100 Identity:28/100 - (28%)
Similarity:45/100 - (45%) Gaps:27/100 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 LKQEEEQARTHQKELKENQE-----------------QQLRELKAKQEREKQ---ERDYQQQKRE 500
            |||.||:|..:..::.:|.|                 |:|.||:|:|:|.|.   |..:.....:
Human    53 LKQLEERAARNVSQVSKNLESHHGDQMAQKSQSTQISQELEELRAEQQRLKSQDLELSWNLNGLQ 117

  Fly   501 HELELLKQRQAEADRQHAAD------EEAEKLRLE 529
            .:|...|.::.. :|..|:|      ||..|||:|
Human   118 ADLSSFKSQELN-ERNEASDLLERLREEVTKLRME 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057
GBP_C <414..508 CDD:303769 18/71 (25%)
TPH 421..756 CDD:290579 27/99 (27%)
coiled coil 483..494 CDD:293879 5/13 (38%)
FCER2NP_001207429.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..85 2/18 (11%)
Repetitive region 69..89 2/19 (11%)
RILP-like <77..153 CDD:304877 19/75 (25%)
Repetitive region 90..110 9/19 (47%)
Repetitive region 111..131 2/20 (10%)
CLECT 163..282 CDD:214480
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 290..321
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.