DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgn and clec-51

DIOPT Version :9

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_501369.1 Gene:clec-51 / 181854 WormBaseID:WBGene00015050 Length:308 Species:Caenorhabditis elegans


Alignment Length:187 Identity:42/187 - (22%)
Similarity:67/187 - (35%) Gaps:42/187 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VYALCPPK--FHRVGTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRLFLQKQDALSG 121
            |.|.|.|.  :...|:.|.::....||:..|...|...:.:|.......|... :..|.|....|
 Worm    16 VSAQCGPGAIYQASGSRCLNVFRTASSFQSAEEICATLSGHLVSIHNTIDNTF-ISSQAQKYFDG 79

  Fly   122 ENDPIWLGA--TYDHHNN--RWQWSMSGRNLSTDSFS------RTDSAYVQLISNSQPLDNNCAI 176
               .:||||  |.....|  .|.|: .|.|....::.      :.|:|.:||.:.:.        
 Worm    80 ---GVWLGAKTTAPDVTNPLNWYWT-DGSNFDYQNYKVGQPSPQGDTACMQLQTGTA-------- 132

  Fly   177 YDPSLKYRWSARPCSDKLRFICQHK------MPKVSGPNR----YKIYNRWNATYPN 223
                   :|....|:.:|.|||.:.      .|.|:.|:.    |..|:..:..|.|
 Worm   133 -------KWQTTNCTAQLPFICSYSSSVTPTCPSVTIPSHCPSGYTWYDETDFCYKN 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057 30/135 (22%)
GBP_C <414..508 CDD:303769
TPH 421..756 CDD:290579
coiled coil 483..494 CDD:293879
clec-51NP_501369.1 CLECT 32..149 CDD:153057 30/136 (22%)
CLECT 166..303 CDD:214480 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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