DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgn and Klra5

DIOPT Version :9

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_032489.1 Gene:Klra5 / 16636 MGIID:101903 Length:266 Species:Mus musculus


Alignment Length:137 Identity:32/137 - (23%)
Similarity:51/137 - (37%) Gaps:21/137 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRLFLQKQDALSGENDPIWLGATYDHH 135
            ||.|:..:..:::|......|:..:..|.   |..|.....|||.|..    :|..|:|.:||..
Mouse   151 GTKCFYFIMSKNTWSGCKQTCQHYSLPLV---KIEDEDELKFLQFQVI----SDSYWIGLSYDKK 208

  Fly   136 NNRWQWSMSGRNLSTDSFSRTDSAYVQLISNSQPLDNNCAIYDPSLKYRWSARPCSDKLRFICQH 200
            ..:|.|..:|.       |:.|....::  |.:|  ..|....   |.|.....|::....||..
Mouse   209 KKQWAWIDNGP-------SKLDMKTRKM--NFKP--GGCIFLS---KTRLEDTNCNNSYFCICGK 259

  Fly   201 KMPKVSG 207
            |:....|
Mouse   260 KLDHFPG 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057 28/125 (22%)
GBP_C <414..508 CDD:303769
TPH 421..756 CDD:290579
coiled coil 483..494 CDD:293879
Klra5NP_032489.1 Ly49 40..157 CDD:369850 3/5 (60%)
CLECT_NK_receptors_like 145..259 CDD:153063 30/128 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841890
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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