DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgn and Klra10

DIOPT Version :9

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_032485.2 Gene:Klra10 / 16628 MGIID:1321093 Length:266 Species:Mus musculus


Alignment Length:160 Identity:33/160 - (20%)
Similarity:52/160 - (32%) Gaps:33/160 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SQDTAAPTSRPKRRVYALCPPKFHRVGTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKL 109
            |:||.....      |..|      ..|.||..:..:::|......|:..:..:.   |..|...
Mouse   137 SRDTGGGVK------YWFC------YSTKCYYFIMNKTTWSGCKANCQHYSVPIV---KIEDEDE 186

  Fly   110 RLFLQKQDALSGENDPIWLGATYDHHNNRWQWSMSGRNLSTDSFSRTDSAYVQLISNSQPLDNNC 174
            ..|||:...    .:..|:|.:||.....|.|..:|.       |:.|....::...|:    .|
Mouse   187 LKFLQRHVI----PESYWIGLSYDKKKKEWAWIDNGP-------SKLDMKIRKMNFKSR----GC 236

  Fly   175 AIYDPSLKYRWSARPCSDKLRFICQHKMPK 204
            ....   |.|.....|:.....||..|:.|
Mouse   237 VFLS---KARIEDTDCNIPYYCICWKKLDK 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057 25/125 (20%)
GBP_C <414..508 CDD:303769
TPH 421..756 CDD:290579
coiled coil 483..494 CDD:293879
Klra10NP_032485.2 Ly49 40..157 CDD:369850 8/31 (26%)
CLECT_NK_receptors_like 145..257 CDD:153063 26/144 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841888
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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