DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgn and Klra1

DIOPT Version :9

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_057868.2 Gene:Klra1 / 16627 MGIID:101907 Length:262 Species:Mus musculus


Alignment Length:121 Identity:34/121 - (28%)
Similarity:51/121 - (42%) Gaps:19/121 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 RVYALCPPKFHRVGTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRLFLQKQDALSGE 122
            :||..|      .|..||..|..|.:|......|:..:.:|.:.....:.|   |||    |...
Mouse   140 KVYWFC------YGMKCYYFVMDRKTWSGCKQTCQSSSLSLLKIDDEDELK---FLQ----LVVP 191

  Fly   123 NDPIWLGATYDHHNNRWQW---SMSGRNLSTDSFSRTDSAYVQLISNSQPLDN-NC 174
            :|..|:|.:||:....|.|   ..|...|:|..::..|.. ..|:|.:: ||| ||
Mouse   192 SDSCWVGLSYDNKKKDWAWIDNRPSKLALNTRKYNIRDGG-CMLLSKTR-LDNGNC 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057 30/105 (29%)
GBP_C <414..508 CDD:303769
TPH 421..756 CDD:290579
coiled coil 483..494 CDD:293879
Klra1NP_057868.2 Ly49 40..153 CDD:285577 6/18 (33%)
Cell attachment site 137..139
CLECT_NK_receptors_like 142..255 CDD:153063 33/119 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841882
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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