DRSC/TRiP Functional Genomics Resources

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Protein Alignment rgn and REG3G

DIOPT Version :9

Sequence 1:NP_001246866.1 Gene:rgn / 40368 FlyBaseID:FBgn0261258 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_001008388.1 Gene:REG3G / 130120 HGNCID:29595 Length:175 Species:Homo sapiens


Alignment Length:189 Identity:42/189 - (22%)
Similarity:62/189 - (32%) Gaps:63/189 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EINFEGPSPAHSQDTAAPTSRPKRRVYALCPPKFHRVGTDCYSLVDQRSSWLEAHFFCKDKNANL 98
            |...|.|||..|                 ||......|:.||:|.....||::|...|:      
Human    28 ETQKELPSPRIS-----------------CPKGSKAYGSPCYALFLSPKSWMDADLACQ------ 69

  Fly    99 TEPGKHADRKLRLFLQKQD---------ALSGENDPIWLGATYDHHN---------NRWQWSMSG 145
                |....||...|...:         ::|.....||:|.    |:         :.|:||   
Human    70 ----KRPSGKLVSVLSGAEGSFVSSLVRSISNSYSYIWIGL----HDPTQGSEPDGDGWEWS--- 123

  Fly   146 RNLSTDSFSRTDSAYVQLISNSQPLDN--NCAIYDPSLKY-RWSARPCSDKLRFICQHK 201
               |||..:     |.....|...:.|  :|.....|..: :|....|..||.::|:.|
Human   124 ---STDVMN-----YFAWEKNPSTILNPGHCGSLSRSTGFLKWKDYNCDAKLPYVCKFK 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgnNP_001246866.1 CLECT 74..200 CDD:153057 32/146 (22%)
GBP_C <414..508 CDD:303769
TPH 421..756 CDD:290579
coiled coil 483..494 CDD:293879
REG3GNP_001008388.1 CLECT_REG-1_like 40..173 CDD:153064 35/157 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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