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Protein Alignment rgn and Clec2d
DIOPT Version :9
Sequence 1: | NP_001246866.1 |
Gene: | rgn / 40368 |
FlyBaseID: | FBgn0261258 |
Length: | 808 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_569086.1 |
Gene: | Clec2d / 113937 |
RGDID: | 620070 |
Length: | 233 |
Species: | Rattus norvegicus |
Alignment Length: | 141 |
Identity: | 33/141 - (23%) |
Similarity: | 56/141 - (39%) |
Gaps: | 35/141 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 MWCCQVFIL----ALFAHTIAVEFHGSAARAEINFEGPSPAHSQDTAAPTSRPKRRVYALCPPKF 67
::||.|.|: |:.|.::|:....:|..:.|| .||.||..:
Rat 74 LYCCYVVIIVLSVAVVALSVALSVKKTAQISTIN----------------------TYAACPRNW 116
Fly 68 HRVGTDCYSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRL-FLQKQDALSGENDPIWLGAT 131
..||..|:...:..|:|..:...||::.|.|. ..|.:..| ||::....|| .|.|..
Rat 117 IGVGNKCFYFNEIPSNWTLSQTLCKEQGAELA----RFDTEEELNFLRRYKGSSG----YWFGLH 173
Fly 132 YDHHNNRWQWS 142
.:...:.|:|:
Rat 174 RESSAHPWKWT 184
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166345298 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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