DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment rgn and zgc:162060

DIOPT Version :9

Sequence 1:	NP_001246866.1	Gene:	rgn / 40368	FlyBaseID:	FBgn0261258	Length:	808	Species:	Drosophila melanogaster
Sequence 2:	NP_001082919.1	Gene:	zgc:162060 / 100001158	ZFINID:	ZDB-GENE-070424-18	Length:	322	Species:	Danio rerio

Alignment Length:	144	Identity:	34/144 - (23%)
Similarity:	57/144 - (39%)	Gaps:	40/144 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    61 ALCPPKFHRVGTDC----YSLVDQRSSWLEAHFFCKDKNANLTEPGKHADRKLRLFLQKQDALSG 121
            |||..      ::|    |..:::..:|.||..:|::|..:|.......|.     :|...::|.
Zfish    13 ALCSI------SECVQRQYHFINENKTWTEAQRYCREKYTDLATVDNMNDT-----IQLMKSVSD 66

  Fly   122 ENDPIWLGATYDHHNNRWQWSMSGRNLSTDSFSRTDSAYVQLISNSQPLD--NNCAIYDPSLKYR 184
            .:  :|:|.     ..:||||..|..|..:            .:|.|| |  :.||.......:.
Zfish    67 VH--LWIGL-----QRKWQWSSGGPALFLN------------WANQQP-DGKDECAFMRNGEWHD 111

  Fly   185 WSARPCSDKLRFIC 198
            |:   ||..|.|:|
Zfish   112 WN---CSYTLFFVC 122

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
rgn	NP_001246866.1	CLECT	74..200	CDD:153057	31/131 (24%)
		GBP_C	<414..508	CDD:303769
		TPH	421..756	CDD:290579
		coiled coil	483..494	CDD:293879
zgc:162060	NP_001082919.1	CLECT_1	23..124	CDD:153072	30/128 (23%)
		CLECT	127..>203	CDD:295302
		CLECT	207..319	CDD:153057
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	0	0.000