DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sa and TAF3

DIOPT Version :9

Sequence 1:NP_649311.1 Gene:sa / 40367 FlyBaseID:FBgn0002842 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_114129.1 Gene:TAF3 / 83860 HGNCID:17303 Length:929 Species:Homo sapiens


Alignment Length:307 Identity:67/307 - (21%)
Similarity:109/307 - (35%) Gaps:84/307 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 CEVVDDVLRQSMLELLRGKFREIARQTTNWSNHAGRCAPSYFDLERTFIRMNIKVGELKAMYEGQ 85
            |.::.|||::.:.:|.||..|        :|...||..|...|:...|..|.:.:.||:      
Human    31 CHLLTDVLQRYLQQLGRGCHR--------YSELYGRTDPILDDVGEAFQLMGVSLHELE------ 81

  Fly    86 PDSLVLVECNAPETQDQDFHSVPQPVLSSTKAVELAS---------TTYIPDHLPPFPGAHTYKS 141
             |.:..:|   |.|..   |.:|...:|....::...         ..||||:|||...:...:.
Human    82 -DYIHNIE---PVTFP---HQIPSFPVSKNNVLQFPQPGSKDAEERKEYIPDYLPPIVSSQEEEE 139

  Fly   142 STIEKV-TD--RSYVAMR-NRHAENELNTQNALN-QYYLRCNP---------------------- 179
            .  |:| ||  .|..||: ....::||..:..:| :.:|...|                      
Human   140 E--EQVPTDGGTSAEAMQVPLEEDDELEEEEIINDENFLGKRPLDSPEAEELPAMKRPRLLSTKG 202

  Fly   180 ---NISLFE--------ETQRD----GSGHV---LDLGPPKK-----LPYSDALMPRNQVFDTDI 221
               ::.|.|        .||:.    ...||   .||.||..     .|.:.:.||..:..:|..
Human   203 DTLDVVLLEAREPLSSINTQKIPPMLSPVHVQDSTDLAPPSPEPPMLAPVAKSQMPTAKPLETKS 267

  Fly   222 YAPIEVITHKALDCRYLEKPKLHSSRPSSGN-FEEEDVEMEEPCSPG 267
            :.| :..|..:...:..:.||...|....|: ........:|..|||
Human   268 FTP-KTKTKTSSPGQKTKSPKTAQSPAMVGSPIRSPKTVSKEKKSPG 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saNP_649311.1 Bromo_TP 6..77 CDD:284856 15/55 (27%)
TAF8 125..177 CDD:176263 18/56 (32%)
TAF3NP_114129.1 BTP 5..79 CDD:128846 15/55 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 131..152 5/22 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 176..197 2/20 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..358 22/94 (23%)
PTZ00449 <229..388 CDD:185628 20/86 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 405..578
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..658
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 692..748
PRK12323 <777..>847 CDD:237057
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 778..807
PHD_TAF3 867..912 CDD:276997
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2389
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.