DRSC/TRiP Functional Genomics Resources

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Protein Alignment sa and taf8

DIOPT Version :9

Sequence 1:NP_649311.1 Gene:sa / 40367 FlyBaseID:FBgn0002842 Length:275 Species:Drosophila melanogaster
Sequence 2:XP_012818203.1 Gene:taf8 / 549471 XenbaseID:XB-GENE-491356 Length:293 Species:Xenopus tropicalis


Alignment Length:271 Identity:71/271 - (26%)
Similarity:110/271 - (40%) Gaps:36/271 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LATVLDNLLASKNCEVVDDVLRQSMLELLRGKFREIARQTTNWSNHAGRCAPSYFDLERTFIRMN 72
            |..|:.:||.....|..:....:|:.|:|:....||.|...::..|..|..|:..|:..|.|.|.
 Frog    27 LQVVVSSLLTEAGFESAEKAAVESLTEMLQSYLSEIGRSAKSYCEHTARTQPTLPDIVVTLIEMG 91

  Fly    73 IKVGELKAMYEGQPDSLVLVECNAPETQDQDFHSVPQPVLSSTKAVELAST----TYIPDHLPPF 133
            ..|..|.| |..:...:|:   .||...:       .||:  .||:.....    .:||.|.|.|
 Frog    92 FNVES
LPA-YAKRSQRMVI---TAPPVTN-------NPVV--PKALSAGQNKQHPAHIPSHFPEF 143

  Fly   134 PGAHTY-KSSTI-EKVTDRSYVAMRNRHAENELNTQNALNQYYLRCNPNISLFEETQRDGSGHVL 196
            |..||| |:.|. |.|.|  |..:|.:.|....:.:.||.::..:.....|||::   |.|...|
 Frog   144 PDPHTYIKTPTYREPVCD--YQVLREKAASQRRDVERALTRFMAKTGETQSLFKD---DTSTFPL 203

  Fly   197 DLGPPKKLPYSDALMPR----NQVFDTDIYAPIEVITHKALDCRYLEKPKLHSSRPSSGNFEEED 257
            ....|..:||.:||:|.    .||.:||        :.:..|....|...:|......|..:|..
 Frog   204 IAARPLSIPYLNALLPSELELQQVEETD--------SSEQDDQTDAENLSMHLQGDEVGMEKENS 260

  Fly   258 VEMEEPCSPGG 268
            ..:::....||
 Frog   261 SVLQQNSMKGG 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saNP_649311.1 Bromo_TP 6..77 CDD:284856 19/68 (28%)
TAF8 125..177 CDD:176263 19/53 (36%)
taf8XP_012818203.1 Bromo_TP 22..96 CDD:369402 19/68 (28%)
TAF8 134..187 CDD:176263 19/54 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1290064at2759
OrthoFinder 1 1.000 - - FOG0002869
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46469
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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