DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ebd2 and Tigd2

DIOPT Version :10

Sequence 1:NP_649307.1 Gene:ebd2 / 40363 FlyBaseID:FBgn0037076 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_001074614.1 Gene:Tigd2 / 68140 MGIID:1915390 Length:525 Species:Mus musculus


Alignment Length:45 Identity:13/45 - (28%)
Similarity:25/45 - (55%) Gaps:8/45 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 THKETMKKHFEQFGEILEAV---VITDKASGRSKGYGFVTFREAE 65
            :||..:    :.:|.||||.   ::|:.|| |...|.:::..::|
Mouse    92 SHKNII----QFYGAILEAPNYGIVTEYAS-RGSLYEYLSSADSE 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ebd2NP_649307.1 CENP-B_N 27..80 CDD:461229 11/42 (26%)
CENPB 101..166 CDD:197828
Tigd2NP_001074614.1 CENP-B_N 4..53 CDD:461229
HTH_Tnp_Tc5 76..135 CDD:460850 13/45 (29%)
DDE_1 207..385 CDD:367380
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.