DRSC/TRiP Functional Genomics Resources

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Protein Alignment ebd2 and CG13895

DIOPT Version :10

Sequence 1:NP_649307.1 Gene:ebd2 / 40363 FlyBaseID:FBgn0037076 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_001261220.1 Gene:CG13895 / 38087 FlyBaseID:FBgn0035158 Length:506 Species:Drosophila melanogaster


Alignment Length:245 Identity:57/245 - (23%)
Similarity:106/245 - (43%) Gaps:45/245 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 NNNNNTKGIKSRRNERNILTFYEKIAVIRYYD----ETNISRNSLAKMFHCCATQIRRILDKKKD 75
            :|::..|........||:||..|::|.||.||    .:.|:||     |:|...||:.|:..::.
  Fly    11 HNDDTHKNSNGSHRIRNVLTLEERVAAIRQYDIVPMYSKIARN-----FNCSWEQIKSIVSNREA 70

  Fly    76 LLQ------QLATLSEADASIIIEEMTRKRRKFEMSAISFLLHEWVERCIQMQLNISIRNQKLKE 134
            :|:      :|:..:..||.:       :|||  ::.:...|:|:::|. |..|:..:..:.::.
  Fly    71 ILEFHKATNRLSQPANKDAEL-------RRRK--LNFLGHCLYEYIQRA-QFYLHSDVNEEMIRN 125

  Fly   135 TAIRMAAVLNLPSFRPSYRWLSRFRNKYKYEAD--ELGYQGENPLNQDLPVEDIIVEF-KHA--- 193
            .||....::.|..|.|:..|::.|:..|.....  ::......|.:.||  .||:... :|.   
  Fly   126 RAIEFRDLMQLDGFVPNKPWINHFKAAYNITLSNRQITIVRRPPRSMDL--RDIMSYCGRHTSMS 188

  Fly   194 ---LPNFMQRELDNPGEAISKAAVMADFVNLSSENSIMSDHPEGDNEVEL 240
               .|...:..|.:....:.:...:   |..||:|...||      ||.|
  Fly   189 CSLAPRSPEPALTSSDRPLYRTKTL---VTTSSQNQATSD------EVHL 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ebd2NP_649307.1 CENP-B_N 27..80 CDD:461229 19/62 (31%)
CENPB 101..166 CDD:197828 14/64 (22%)
CG13895NP_001261220.1 CENP-B_N 24..74 CDD:461229 19/54 (35%)
CENPB 93..159 CDD:197828 16/68 (24%)
CENPB 232..298 CDD:197828
Blue background indicates that the domain is not in the aligned region.

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