DRSC/TRiP Functional Genomics Resources

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Protein Alignment ebd2 and Tigd3

DIOPT Version :9

Sequence 1:NP_001246865.1 Gene:ebd2 / 40363 FlyBaseID:FBgn0037076 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_001348974.1 Gene:Tigd3 / 332359 MGIID:2681860 Length:470 Species:Mus musculus


Alignment Length:453 Identity:91/453 - (20%)
Similarity:150/453 - (33%) Gaps:165/453 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NTKGIKSRRNERNILTFYEKIAVIRYYDETNISRNSLAKMFHCCATQIRRILDKKKDLLQQLATL 83
            |||      .:.:.|:..|||.|:...||:.:|::.:|:.|.....||.||...|:.||      
Mouse     4 NTK------KKLHALSLAEKIQVLELLDESKMSQSEVARRFQVSQPQISRICKNKEKLL------ 56

  Fly    84 SEAD-ASIIIEEMTRKRRKFEMSAISFLLHEW--VERCIQMQLNISIRNQKLKETAIRMAAVLNL 145
              || .|.......:::|:.:.|.|...|..|  :.|.....:...:...|.||.|..|.     
Mouse    57 --ADWCSGTANHERKRKRESKYSGIDEALLCWYHIARAKAWDVTGPMLLHKAKELADIMG----- 114

  Fly   146 PSFRPSYRWLSRFRNK--------------YKYEADE--LGYQGENPLN-QDLPVEDI-----IV 188
            ..|.||..||.|::.:              :..||..  |..|.:.||: :|...||:     :.
Mouse   115 QDFVPSIGWLVRWKRRNNVGFGTRQVLVPLFPPEAPPAVLPSQAQPPLSLKDFSPEDVFGCAEVP 179

  Fly   189 EFKHALP------NFMQRELDNPGEAISKAAVMAD--------FVNLSSENSIMSDHPE------ 233
            ....|:|      :.:|..|........|..|...        |..:|||....|.||:      
Mouse   180 LLYRAVPGRVFECDRLQVLLCANSRGTEKRRVFVGGLQAAPRCFFGVSSEALPTSYHPDLAIPWS 244

  Fly   234 ---------------------------------GDNEVELVTCEPTMMSSPSSTPDAAEGEIPL- 264
                                             |.:.|.|:.     :|:.|:|| :..|.:.| 
Mouse   245 EWLAQFDQDMGQQGRQVALLLASGVVEEWASLPGLHHVRLLP-----LSASSTTP-SLPGSVILA 303

  Fly   265 -QAHGDQENPDDQINAGTSTLLNGVFPHLAIIHQFALMNSD---------------VQALELISQ 313
             :||                     :.| .::.:.|.|.|.               :.||.:::.
Mouse   304 FKAH---------------------YRH-RLLSKLAAMQSGKEGTSLAEARASITVLDALHMVAA 346

  Fly   314 LGVHMQQQAVSGAYHNLSLATTDGDGQDDPGEIAL--------SELPPG------SIYADIDD 362
            ....:.:|.:..::....||         ||:..|        |.:|.|      |.:.|::|
Mouse   347 AWAKVPRQLILSSFVQEGLA---------PGKTPLSLDKDTEMSPVPSGLSQEEFSHFVDLED 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ebd2NP_001246865.1 CENP-B_N 27..80 CDD:282122 17/52 (33%)
CENPB 101..166 CDD:197828 16/80 (20%)
Tigd3NP_001348974.1 HTH 6..57 CDD:328727 18/64 (28%)
HTH_Tnp_Tc5 76..133 CDD:308705 16/61 (26%)
rve 193..360 CDD:328789 29/194 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 402..426
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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